Hs07156719_cn

• Gene Symbol: HOMER3
• Assay Reference Genome Location: Chr.19:18937841 on build GRCh38
• Cytoband: 19p13.11

Target Gene Details

• Entrez Gene ID: 9454
• Gene Name: homer scaffolding protein 3
• Gene Aliases: HOMER-3, VESL3
• Location: Chr.19:18929201-18941258 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HOMER3	NM_001145721.1			NP_001139193.1
	NM_001145722.1			NP_001139194.1
	NM_001145724.1			NP_001139196.1
	NM_004838.3			NP_004829.3
	NR_027297.1
	XM_006722943.1			XP_006723006.1
	XM_006722944.1			XP_006723007.1
	AF093265.1			AAC71029.1
	AK124450.1
	AK313995.1
	AL529052.3
	BC012113.1			AAH12113.1
	BT019464.1			AAV38271.1
	Y17573.1			CAB75536.1
	Y18894.1			CAB75543.1
	Y18895.1			CAB75544.1
	Y18896.1			CAB75545.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv470132	Chr.19:18853633 - 18943911 on Build GRCh38	Loss	LOC102724360 HOMER3 COPE UPF1 GDF1 DDX49 CERS1
nsv833778	Chr.19:18901860 - 19090678 on Build GRCh38	Loss	SUGP2 LOC102724360 SLC25A42 HOMER3 ARMC6 COPE DDX49
nsv1151217	Chr.19:18627369 - 19284914 on Build GRCh38	Deletion	SUGP2 RFXANK CRTC1 HOMER3 UPF1 COMP SUGP1 DDX49 HAPLN4 TM6SF2 BORCS8-MEF2B MEF2B BORCS8 LOC102724360 SLC25A42 NCAN ARMC6 COPE GDF1 NR2C2AP KLHL26 CERS1 TMEM161A
nsv952423	Chr.19:18859292 - 18941091 on Build GRCh38	Deletion	LOC102724360 HOMER3 COPE UPF1 GDF1 DDX49 CERS1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

protein targeting
G-protein coupled glutamate receptor signaling pathway

Function(s)

protein binding
protein C-terminus binding
protein domain specific binding
G-protein coupled glutamate receptor binding