Hs07159237_cn

• Gene Symbol: NFIX
• Assay Reference Genome Location: Chr.19:13022197 on build GRCh38
• Cytoband: 19p13.13

Target Gene Details

• Entrez Gene ID: 4784
• Gene Name: nuclear factor I X
• Gene Aliases: MRSHSS, NF1A, SOTOS2
• Location: Chr.19:12995512-13098796 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NFIX	NM_002501.3			NP_002492.2
	XM_005259918.4			XP_005259975.1
	XM_017026837.1			XP_016882326.1
	BF115883.1
	BT019732.1			AAV38537.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv828444	Chr.19:13012681 - 13027353 on Build GRCh38	Loss	NFIX
nsv1055900	Chr.19:12979147 - 13034197 on Build GRCh38	Gain	NFIX
nsv953977	Chr.19:12666887 - 13095486 on Build GRCh38	Deletion	FARSA DNASE2 ASNA1 SNORD135 DAND5 MIR6794 SNORD41 FBXW9 JUNB GADD45GIP1 NFIX PRDX2 C19orf43 CALR WDR83 RAD23A DHPS BEST2 MIR6515 RTBDN WDR83OS LOC105372280 KLF1 RNASEH2A SYCE2 HOOK2 MIR5695 MAST1 TNPO2 GCDH MIR5684
nsv2422	Chr.19:13000362 - 13032711 on Build GRCh38	Insertion	NFIX
nsv833754	Chr.19:12876208 - 13028186 on Build GRCh38	Loss	FARSA MIR6515 DNASE2 MIR5695 DAND5 KLF1 GCDH GADD45GIP1 NFIX CALR SYCE2 RAD23A

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA replication
transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding