Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 284415 |
Gene Name: | V-set and transmembrane domain containing 1 |
Gene Aliases: |
SIRL-1, SIRL1, UNQ3033 |
Location: |
Chr.19:54040825-54063966 on Build GRCh38 |
Assay Gene Location: | Within Intron 7 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| VSTM1 | NM_001288791.1 | NP_001275720.1 | ||
| NM_001288792.1 | NP_001275721.1 | |||
| NM_001288793.1 | NP_001275722.1 | |||
| NM_198481.3 | NP_940883.2 | |||
| NR_110142.1 | ||||
| XM_011526845.1 | XP_011525147.1 | |||
| XM_011526846.1 | XP_011525148.1 | |||
| XM_011526847.1 | XP_011525149.1 | |||
| XM_011526848.1 | XP_011525150.1 | |||
| XM_011526849.1 | XP_011525151.1 | |||
| XM_017026666.1 | XP_016882155.1 | |||
| AY358542.1 | AAQ88906.1 | |||
| BC100943.2 | AAI00944.1 | |||
| BQ446114.1 | ||||
| DQ479397.1 | ||||
| FJ584316.1 | ||||
| FJ584317.1 | ||||
| FJ584318.1 | ||||
| FJ584319.1 | ||||
| FJ584320.1 | ||||
| FJ882051.1 | ||||
| FN398145.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv458782 | Chr.19:53961144 - 54093354 on Build GRCh38 | Gain |
 MIR935
VSTM1
TARM1
CACNG8
CACNG6
|
| nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion |
VSTM1
NDUFA3
PRPF31
TARM1
TFPT
OSCAR
|
| nsv1063127 | Chr.19:53926876 - 54068977 on Build GRCh38 | Gain |
MIR935
VSTM1
CACNG7
CACNG8
CACNG6
|
| nsv1057516 | Chr.19:53986233 - 54046901 on Build GRCh38 | Gain |
VSTM1
CACNG8
CACNG6
|
| esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion |
MBOAT7
DPRX
PRPF31
MIR520A
MIR524
LILRB5
MIR512-2
CACNG6
MIR517A
MIR373
VN1R2
TPM3P9
LILRA6
MIR521-2
CNOT3
MIR519B
LILRB3
MIR526A2
MIR515-1
OSCAR
MIR521-1
ZNF845
BIRC8
MIR519E
MIR4752
MIR516B2
MIR520G
MIR520D
RPS9
MIR519D
CACNG8
ZNF665
NLRP12
MIR520H
MIR525
FAM90A27P
MIR522
TMC4
MYADM
MIR519A1
MIR1283-1
MIR517C
MIR516A2
MIR518A2
MIR371B
MIR519C
MIR527
LOC105372457
ZNF677
MIR523
CACNG7
ZNF818P
ZNF765
MIR520B
MIR518C
ZNF525
MIR519A2
MIR935
MIR518A1
VN1R4
LENG1
PRKCG
NDUFA3
MIR498
MIR520C
MIR518F
ZNF331
TFPT
TSEN34
MIR526A1
MIR1283-2
MIR515-2
ZNF813
MIR526B
MIR518B
TARM1
MIR371A
MIR520E
LOC284379
LILRB2
MIR520F
LILRA5
MIR518D
VSTM1
MIR518E
MIR1323
MIR516B1
ZNF761
MIR372
MIR512-1
MIR516A1
MIR517B
|
| nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss |
MIR935
VSTM1
NDUFA3
PRPF31
TARM1
CACNG8
TFPT
CACNG6
OSCAR
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
Back To Top