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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88940244 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07401058_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BE676580.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 1 206 NP_001277259.1
AK130238.1 1 104 BAC85311.1
HY074528.1 1 206

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss PIEZO1 CBFA2T3 APRT PABPN1L GALNS LOC105371409 LOC100129697 LOC107987238 LOC101927793 TRAPPC2L CDT1
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain CBFA2T3 LOC105371409 LOC100129697
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain SLC22A31 PABPN1L LOC100289580 GALNS LOC105371409 LOC100129697 LOC107987238 LOC101927793 LOC400558 CDH15 MIR4722 ZNF778 ACSF3 PIEZO1 CBFA2T3 APRT LINC00304 CTU2 LOC339059 TRAPPC2L CDT1
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss SLC22A31 PABPN1L GALNS LOC105371409 LOC100129697 LOC107987238 LOC101927793 LOC400558 CDH15 ACSF3 CBFA2T3 APRT LINC00304 TRAPPC2L CDT1
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain SLC22A31 PABPN1L LOC100289580 ANKRD11 GALNS LOC105371409 LOC100129697 LOC105371414 LOC107987238 LOC101927793 LOC100287036 LOC400558 CDH15 ZNF778 ACSF3 PIEZO1 CBFA2T3 APRT LINC00304 LOC339059 TRAPPC2L CDT1
nsv1071313 Chr.16:88939991 - 88941892 on Build GRCh38 Deletion CBFA2T3 LOC100129697
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss PABPN1L GALNS LOC105371409 LOC100129697 LOC107987238 LOC101927793 LOC400558 CDH15 ACSF3 CBFA2T3 APRT LINC00304 TRAPPC2L CDT1
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion CBFA2T3 APRT PABPN1L GALNS LOC105371409 LOC100129697 LOC107987238 LOC101927793 TRAPPC2L CDT1
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SPATA33 SPIRE2 LOC101927817 TUBB3 LOC100129697 LOC107987238 LOC101927793 FANCA CPNE7 DEF8 ZNF778 PIEZO1 MC1R LINC00304 CHMP1A TRAPPC2L URAHP PRDM7 VPS9D1 RNF166 ANKRD11 CYBA GAS8-AS1 LOC400558 DBNDD1 SPATA2L CTU2 LOC339059 TCF25 ZNF276 CENPBD1 SLC22A31 PABPN1L LOC107984817 LOC105371409 LOC105371414 VPS9D1-AS1 FAM157C LOC100287036 CDH15 ACSF3 IL17C MVD CBFA2T3 LOC105371419 SNAI3-AS1 APRT RPL13 AFG3L1P CDT1 CDK10 LOC100289580 GALNS DPEP1 SNORD68 MIR4722 SNAI3 GAS8 TUBB8P7 SPG7
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain PABPN1L LOC100289580 GALNS LOC105371409 LOC100129697 LOC107987238 LOC101927793 MIR4722 PIEZO1 CBFA2T3 APRT CTU2 LOC339059 TRAPPC2L CDT1

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