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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88940340 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07401059_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BE676580.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 1 - Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss PIEZO1 GALNS TRAPPC2L CBFA2T3 CDT1 LOC107987238 PABPN1L LOC100129697 LOC101927793 LOC105371409 APRT
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain CBFA2T3 LOC100129697 LOC105371409
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain PIEZO1 GALNS CDT1 LOC107987238 SLC22A31 ZNF778 CTU2 LOC400558 PABPN1L APRT ACSF3 TRAPPC2L CBFA2T3 LOC100289580 MIR4722 CDH15 LINC00304 LOC100129697 LOC101927793 LOC105371409 LOC339059
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss GALNS CDT1 LOC107987238 SLC22A31 LOC400558 PABPN1L APRT ACSF3 TRAPPC2L CBFA2T3 CDH15 LINC00304 LOC100129697 LOC101927793 LOC105371409
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain PIEZO1 GALNS ANKRD11 CDT1 LOC107987238 SLC22A31 ZNF778 LOC400558 PABPN1L APRT ACSF3 TRAPPC2L CBFA2T3 LOC100289580 CDH15 LOC100287036 LINC00304 LOC100129697 LOC105371414 LOC101927793 LOC105371409 LOC339059
nsv1071313 Chr.16:88939991 - 88941892 on Build GRCh38 Deletion CBFA2T3 LOC100129697
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss GALNS CDT1 LOC107987238 LOC400558 PABPN1L APRT ACSF3 TRAPPC2L CBFA2T3 CDH15 LINC00304 LOC100129697 LOC101927793 LOC105371409
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion GALNS TRAPPC2L CBFA2T3 CDT1 LOC107987238 PABPN1L LOC100129697 LOC101927793 LOC105371409 APRT
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss MVD SLC22A31 CYBA URAHP FAM157C TUBB3 CBFA2T3 LOC107984817 FANCA LINC00304 LOC105371414 LOC101927793 TCF25 DEF8 CDK10 ZNF778 LOC400558 APRT VPS9D1-AS1 LOC100289580 SPATA2L ZNF276 CHMP1A DPEP1 CDH15 LOC100287036 LOC105371409 SNAI3 ANKRD11 CDT1 CPNE7 LOC107987238 RPL13 SNORD68 PABPN1L GAS8-AS1 ACSF3 SPATA33 TRAPPC2L GAS8 LOC105371419 SNAI3-AS1 IL17C SPIRE2 LOC101927817 LOC339059 PIEZO1 GALNS SPG7 RNF166 DBNDD1 CTU2 TUBB8P7 VPS9D1 MC1R AFG3L1P MIR4722 LOC100129697 PRDM7 CENPBD1
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain PIEZO1 GALNS CDT1 LOC107987238 CTU2 PABPN1L APRT TRAPPC2L CBFA2T3 LOC100289580 MIR4722 LOC100129697 LOC101927793 LOC105371409 LOC339059

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