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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88942003 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07401650_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC100129697 PIEZO1 LOC105371409 LOC101927793 CDT1 CBFA2T3 PABPN1L LOC107987238 GALNS TRAPPC2L APRT
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC100129697 LOC105371409 CBFA2T3
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC100129697 PIEZO1 CBFA2T3 CDH15 ACSF3 LOC400558 LOC107987238 LOC100289580 SLC22A31 GALNS APRT CTU2 LOC105371409 LOC101927793 CDT1 PABPN1L LINC00304 LOC339059 MIR4722 ZNF778 TRAPPC2L
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss LOC100129697 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LOC100129697 CBFA2T3 CDH15 ACSF3 LOC400558 LOC107987238 SLC22A31 GALNS APRT LOC105371409 LOC101927793 CDT1 PABPN1L LINC00304 TRAPPC2L
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC100129697 PIEZO1 LOC105371414 CBFA2T3 CDH15 ACSF3 LOC400558 LOC107987238 LOC100289580 SLC22A31 GALNS ANKRD11 APRT LOC105371409 LOC101927793 LOC100287036 CDT1 PABPN1L LINC00304 LOC339059 ZNF778 TRAPPC2L
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC100129697 CBFA2T3 CDH15 ACSF3 LOC400558 LOC107987238 GALNS APRT LOC105371409 LOC101927793 CDT1 PABPN1L LINC00304 TRAPPC2L
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC100129697 LOC105371409 LOC101927793 CDT1 CBFA2T3 PABPN1L LOC107987238 GALNS TRAPPC2L APRT
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss RPL13 CDK10 LOC105371414 DBNDD1 LOC101927817 ACSF3 LOC107987238 IL17C SLC22A31 GALNS SPATA2L APRT AFG3L1P LOC105371409 LOC107984817 LOC100129697 MC1R CBFA2T3 MVD LOC400558 PRDM7 CYBA RNF166 CTU2 CDT1 TUBB8P7 GAS8-AS1 SPATA33 TRAPPC2L TUBB3 LOC105371419 DPEP1 CDH15 VPS9D1-AS1 CHMP1A ANKRD11 SPG7 ZNF276 LOC101927793 SPIRE2 LOC100287036 SNAI3-AS1 CPNE7 VPS9D1 ZNF778 URAHP PIEZO1 FANCA LOC100289580 FAM157C TCF25 CENPBD1 PABPN1L DEF8 SNORD68 LINC00304 LOC339059 GAS8 SNAI3 MIR4722
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC100129697 PIEZO1 CBFA2T3 LOC107987238 LOC100289580 GALNS APRT CTU2 LOC105371409 LOC101927793 CDT1 PABPN1L LOC339059 MIR4722 TRAPPC2L

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