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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88942231 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07401961_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss GALNS LOC107987238 PIEZO1 LOC105371409 CBFA2T3 TRAPPC2L LOC100129697 CDT1 LOC101927793 APRT PABPN1L
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain MIR4722 PIEZO1 CBFA2T3 LOC100289580 LOC400558 LOC100129697 CDH15 CDT1 APRT SLC22A31 GALNS LOC107987238 ACSF3 LOC105371409 TRAPPC2L LINC00304 ZNF778 LOC339059 LOC101927793 CTU2 PABPN1L
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC105371409 CBFA2T3 LOC100129697
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss CBFA2T3 LOC400558 LOC100129697 CDH15 CDT1 APRT SLC22A31 GALNS LOC107987238 ACSF3 LOC105371409 TRAPPC2L LINC00304 LOC101927793 PABPN1L
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain PIEZO1 CBFA2T3 LOC100289580 LOC400558 LOC100129697 CDH15 CDT1 APRT SLC22A31 LOC100287036 GALNS LOC107987238 ANKRD11 ACSF3 LOC105371409 TRAPPC2L LINC00304 LOC105371414 ZNF778 LOC339059 LOC101927793 PABPN1L
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion GALNS LOC107987238 LOC105371409 CBFA2T3 TRAPPC2L LOC100129697 CDT1 LOC101927793 APRT PABPN1L
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss CBFA2T3 LOC400558 LOC100129697 CDH15 CDT1 APRT GALNS LOC107987238 ACSF3 LOC105371409 TRAPPC2L LINC00304 LOC101927793 PABPN1L
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss AFG3L1P PIEZO1 SNAI3 VPS9D1 DEF8 SPG7 GAS8 IL17C ANKRD11 LINC00304 ZNF276 TUBB8P7 VPS9D1-AS1 MC1R GAS8-AS1 RPL13 PRDM7 SPIRE2 LOC400558 LOC100129697 FANCA SLC22A31 GALNS ACSF3 SNORD68 URAHP LOC101927817 CYBA RNF166 TCF25 LOC105371419 CDH15 CHMP1A SPATA33 MVD LOC105371409 CPNE7 ZNF778 LOC339059 CTU2 PABPN1L TUBB3 MIR4722 DPEP1 CBFA2T3 LOC100289580 CENPBD1 FAM157C CDT1 APRT LOC100287036 LOC107987238 SPATA2L LOC107984817 CDK10 TRAPPC2L LOC105371414 SNAI3-AS1 DBNDD1 LOC101927793
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain MIR4722 PIEZO1 CBFA2T3 LOC100289580 LOC100129697 CDT1 APRT GALNS LOC107987238 LOC105371409 TRAPPC2L LOC339059 LOC101927793 CTU2 PABPN1L

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