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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88942320 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07401974_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC100129697 APRT LOC101927793 GALNS LOC107987238 CBFA2T3 TRAPPC2L CDT1 LOC105371409 PABPN1L PIEZO1
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain APRT LOC339059 GALNS CDH15 MIR4722 ACSF3 LOC100289580 LOC105371409 LOC100129697 LOC101927793 LOC400558 LOC107987238 CBFA2T3 TRAPPC2L CDT1 CTU2 SLC22A31 ZNF778 PABPN1L PIEZO1 LINC00304
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC100129697 CBFA2T3 LOC105371409
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss LOC100129697 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss APRT GALNS CDH15 ACSF3 LOC105371409 LOC100129697 LOC101927793 LOC400558 LOC107987238 CBFA2T3 TRAPPC2L CDT1 SLC22A31 PABPN1L LINC00304
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain APRT LOC339059 GALNS CDH15 ACSF3 LOC100289580 ANKRD11 LOC105371409 LOC105371414 LOC100129697 LOC101927793 LOC400558 LOC100287036 LOC107987238 CBFA2T3 TRAPPC2L CDT1 SLC22A31 ZNF778 PABPN1L PIEZO1 LINC00304
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC100129697 APRT LOC101927793 GALNS LOC107987238 CBFA2T3 TRAPPC2L CDT1 LOC105371409 PABPN1L
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss APRT GALNS CDH15 ACSF3 LOC105371409 LOC100129697 LOC101927793 LOC400558 LOC107987238 CBFA2T3 TRAPPC2L CDT1 PABPN1L LINC00304
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss PRDM7 TUBB3 GALNS URAHP SPATA2L GAS8 LOC105371409 SNAI3 IL17C LOC400558 LOC107984817 TRAPPC2L CTU2 MVD SNAI3-AS1 DPEP1 ZNF276 LOC101927817 SPATA33 MIR4722 CDK10 LOC105371419 LOC100289580 SPIRE2 TUBB8P7 LOC100129697 RPL13 LOC100287036 LINC00304 SPG7 TCF25 DBNDD1 GAS8-AS1 CYBA DEF8 LOC339059 FAM157C CDH15 FANCA ANKRD11 AFG3L1P VPS9D1 CENPBD1 CBFA2T3 MC1R ZNF778 PABPN1L PIEZO1 CHMP1A VPS9D1-AS1 APRT CPNE7 ACSF3 SNORD68 LOC105371414 LOC101927793 LOC107987238 CDT1 RNF166 SLC22A31
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain APRT LOC339059 GALNS MIR4722 LOC100289580 LOC105371409 LOC100129697 LOC101927793 LOC107987238 CBFA2T3 TRAPPC2L CDT1 CTU2 PABPN1L PIEZO1

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