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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88942320 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07401974_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss APRT PIEZO1 LOC107987238 LOC105371409 CDT1 PABPN1L TRAPPC2L GALNS LOC101927793 LOC100129697 CBFA2T3
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC105371409 LOC100129697 CBFA2T3
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain MIR4722 LOC100289580 LOC400558 LOC107987238 CTU2 GALNS LOC101927793 ACSF3 LOC100129697 LOC339059 APRT PIEZO1 LOC105371409 CDT1 PABPN1L TRAPPC2L SLC22A31 LINC00304 CDH15 ZNF778 CBFA2T3
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss LOC100129697 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LOC400558 LOC107987238 GALNS LOC101927793 ACSF3 LOC100129697 APRT LOC105371409 CDT1 PABPN1L TRAPPC2L SLC22A31 LINC00304 CDH15 CBFA2T3
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC100289580 LOC400558 LOC107987238 GALNS LOC101927793 ACSF3 LOC100129697 LOC339059 APRT PIEZO1 LOC105371409 CDT1 PABPN1L TRAPPC2L LOC105371414 SLC22A31 LINC00304 LOC100287036 CDH15 ZNF778 ANKRD11 CBFA2T3
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC400558 LOC107987238 GALNS LOC101927793 ACSF3 LOC100129697 APRT LOC105371409 CDT1 PABPN1L TRAPPC2L LINC00304 CDH15 CBFA2T3
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion APRT LOC107987238 LOC105371409 CDT1 PABPN1L TRAPPC2L GALNS LOC101927793 LOC100129697 CBFA2T3
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SNAI3 TUBB3 VPS9D1 GALNS LOC107984817 LOC101927793 SPATA2L LOC101927817 SPG7 PIEZO1 CDK10 LOC105371414 SLC22A31 LOC100287036 ZNF276 MVD VPS9D1-AS1 LOC105371419 LOC100289580 CTU2 GAS8-AS1 IL17C PRDM7 SNORD68 DEF8 RNF166 SPIRE2 RPL13 FANCA CPNE7 DPEP1 ANKRD11 DBNDD1 MIR4722 LOC400558 MC1R CHMP1A LOC339059 CENPBD1 LOC105371409 PABPN1L FAM157C SPATA33 CDH15 ZNF778 TCF25 CYBA SNAI3-AS1 LOC107987238 URAHP ACSF3 LOC100129697 APRT CDT1 TRAPPC2L GAS8 TUBB8P7 LINC00304 AFG3L1P CBFA2T3
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain MIR4722 LOC100289580 LOC107987238 CTU2 GALNS LOC101927793 LOC100129697 LOC339059 APRT PIEZO1 LOC105371409 CDT1 PABPN1L TRAPPC2L CBFA2T3

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