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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88942805 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07402272_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC107987238 LOC105371409 GALNS CDT1 TRAPPC2L PIEZO1 CBFA2T3 PABPN1L LOC101927793 LOC100129697 APRT
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC105371409 CBFA2T3 LOC100129697
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC107987238 ACSF3 ZNF778 CDT1 TRAPPC2L PIEZO1 MIR4722 LOC400558 CBFA2T3 LOC101927793 LOC100289580 LOC100129697 APRT LOC339059 CDH15 LOC105371409 GALNS SLC22A31 LINC00304 PABPN1L CTU2
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LOC107987238 ACSF3 CDT1 TRAPPC2L LOC400558 CBFA2T3 LOC101927793 LOC100129697 APRT CDH15 LOC105371409 GALNS SLC22A31 LINC00304 PABPN1L
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC107987238 LOC105371414 ACSF3 ZNF778 CDT1 TRAPPC2L PIEZO1 LOC400558 CBFA2T3 LOC101927793 LOC100289580 LOC100129697 APRT LOC339059 CDH15 LOC105371409 GALNS LOC100287036 SLC22A31 LINC00304 PABPN1L ANKRD11
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC107987238 ACSF3 CDT1 TRAPPC2L LOC400558 CBFA2T3 LOC101927793 LOC100129697 APRT CDH15 LOC105371409 GALNS LINC00304 PABPN1L
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC107987238 LOC105371409 GALNS CDT1 TRAPPC2L CBFA2T3 PABPN1L LOC101927793 LOC100129697 APRT
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC107987238 FAM157C CDK10 ACSF3 DPEP1 CDT1 MVD CHMP1A LOC101927817 SLC22A31 SPATA33 CENPBD1 RNF166 LOC107984817 TRAPPC2L PIEZO1 VPS9D1 CBFA2T3 LOC100289580 SNAI3 TCF25 CDH15 GALNS LINC00304 TUBB3 ANKRD11 LOC105371414 RPL13 SPIRE2 SPG7 CPNE7 LOC100129697 APRT ZNF276 LOC105371409 FANCA TUBB8P7 LOC105371419 LOC100287036 GAS8-AS1 SNAI3-AS1 IL17C GAS8 PABPN1L MC1R DBNDD1 DEF8 ZNF778 PRDM7 CYBA MIR4722 VPS9D1-AS1 LOC400558 LOC101927793 URAHP SNORD68 LOC339059 AFG3L1P SPATA2L CTU2
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC107987238 CDT1 TRAPPC2L PIEZO1 MIR4722 CBFA2T3 LOC101927793 LOC100289580 LOC100129697 APRT LOC339059 LOC105371409 GALNS PABPN1L CTU2

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