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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88942805 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07402272_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss TRAPPC2L CDT1 APRT GALNS PIEZO1 LOC100129697 CBFA2T3 LOC107987238 LOC101927793 PABPN1L LOC105371409
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain GALNS PIEZO1 SLC22A31 CBFA2T3 ZNF778 LOC107987238 LOC101927793 PABPN1L ACSF3 TRAPPC2L CDT1 APRT CTU2 LOC100289580 LOC400558 MIR4722 LOC339059 LOC100129697 LINC00304 LOC105371409 CDH15
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC100129697 CBFA2T3 LOC105371409
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss LOC100129697 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss GALNS SLC22A31 CBFA2T3 LOC107987238 LOC101927793 PABPN1L ACSF3 TRAPPC2L CDT1 APRT LOC400558 LOC100129697 LINC00304 LOC105371409 CDH15
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain GALNS LOC100287036 PIEZO1 SLC22A31 CBFA2T3 ZNF778 LOC107987238 LOC101927793 PABPN1L ACSF3 TRAPPC2L CDT1 APRT ANKRD11 LOC100289580 LOC400558 LOC339059 LOC100129697 LOC105371414 LINC00304 LOC105371409 CDH15
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion TRAPPC2L CDT1 APRT GALNS LOC100129697 CBFA2T3 LOC107987238 LOC101927793 PABPN1L LOC105371409
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss GALNS CBFA2T3 LOC107987238 LOC101927793 PABPN1L ACSF3 TRAPPC2L CDT1 APRT LOC400558 LOC100129697 LINC00304 LOC105371409 CDH15
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss URAHP GAS8 TUBB3 PABPN1L MIR4722 MVD SPG7 LINC00304 DBNDD1 MC1R CHMP1A CENPBD1 CBFA2T3 VPS9D1-AS1 LOC101927793 ACSF3 SPATA2L AFG3L1P FANCA CPNE7 CDT1 APRT LOC100289580 LOC400558 LOC339059 LOC105371419 RPL13 SLC22A31 SPIRE2 LOC107987238 ZNF276 DPEP1 SNAI3-AS1 SPATA33 LOC105371409 CDH15 TCF25 GAS8-AS1 GALNS CDK10 LOC100287036 PIEZO1 SNORD68 IL17C ZNF778 SNAI3 LOC101927817 TRAPPC2L PRDM7 TUBB8P7 ANKRD11 CTU2 DEF8 VPS9D1 FAM157C CYBA LOC100129697 RNF166 LOC105371414 LOC107984817
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain GALNS PIEZO1 CBFA2T3 LOC107987238 LOC101927793 PABPN1L TRAPPC2L CDT1 APRT CTU2 LOC100289580 MIR4722 LOC339059 LOC100129697 LOC105371409

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