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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88942899 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07402284_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC100129697 LOC101927793 TRAPPC2L GALNS APRT LOC107987238 LOC105371409 PABPN1L PIEZO1 CDT1 CBFA2T3
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC100129697 LOC105371409 CBFA2T3
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC100129697 LOC101927793 TRAPPC2L ACSF3 GALNS LOC339059 PABPN1L CDT1 CBFA2T3 ZNF778 CTU2 LOC100289580 APRT LOC107987238 LINC00304 LOC105371409 PIEZO1 LOC400558 CDH15 MIR4722 SLC22A31
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss LOC100129697 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LOC100129697 LOC101927793 TRAPPC2L ACSF3 GALNS PABPN1L CDT1 CBFA2T3 APRT LOC107987238 LINC00304 LOC105371409 LOC400558 CDH15 SLC22A31
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC100129697 LOC101927793 LOC105371414 LOC100287036 TRAPPC2L ACSF3 GALNS LOC339059 PABPN1L CDT1 ANKRD11 CBFA2T3 ZNF778 LOC100289580 APRT LOC107987238 LINC00304 LOC105371409 PIEZO1 LOC400558 CDH15 SLC22A31
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC100129697 LOC101927793 TRAPPC2L ACSF3 GALNS PABPN1L CDT1 CBFA2T3 APRT LOC107987238 LINC00304 LOC105371409 LOC400558 CDH15
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC100129697 LOC101927793 TRAPPC2L GALNS APRT LOC107987238 LOC105371409 PABPN1L CDT1 CBFA2T3
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC107984817 VPS9D1-AS1 LOC100129697 FANCA LOC100287036 ANKRD11 CTU2 DBNDD1 LOC101927817 APRT SNAI3 GAS8-AS1 ZNF276 CENPBD1 CDK10 TRAPPC2L ACSF3 RPL13 PABPN1L SPATA33 CDT1 SPG7 SNORD68 SNAI3-AS1 FAM157C RNF166 SLC22A31 PRDM7 URAHP CYBA AFG3L1P DEF8 LOC101927793 LOC105371414 LOC105371419 SPIRE2 GALNS LOC339059 CPNE7 CBFA2T3 DPEP1 TUBB3 SPATA2L LOC105371409 PIEZO1 TUBB8P7 GAS8 IL17C ZNF778 VPS9D1 LOC100289580 TCF25 MVD CHMP1A LOC107987238 LINC00304 LOC400558 CDH15 MIR4722 MC1R
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC100129697 LOC101927793 TRAPPC2L GALNS LOC339059 PABPN1L CDT1 CBFA2T3 CTU2 LOC100289580 APRT LOC107987238 LOC105371409 PIEZO1 MIR4722

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