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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88943319 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07402585_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC100129697 GALNS PABPN1L TRAPPC2L LOC105371409 APRT LOC101927793 CDT1 CBFA2T3 LOC107987238 PIEZO1
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC100129697 LOC105371409 CBFA2T3
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain GALNS TRAPPC2L LOC105371409 MIR4722 CDH15 CBFA2T3 LOC107987238 SLC22A31 LOC400558 LOC100129697 ACSF3 PABPN1L CTU2 APRT LOC339059 LOC101927793 LOC100289580 CDT1 LINC00304 PIEZO1 ZNF778
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss LOC100129697 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss GALNS TRAPPC2L LOC105371409 CDH15 CBFA2T3 LOC107987238 SLC22A31 LOC400558 LOC100129697 ACSF3 PABPN1L APRT LOC101927793 CDT1 LINC00304
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain GALNS LOC105371414 TRAPPC2L LOC105371409 CDH15 CBFA2T3 LOC107987238 SLC22A31 LOC400558 LOC100129697 ACSF3 ANKRD11 PABPN1L APRT LOC339059 LOC101927793 LOC100289580 LOC100287036 CDT1 LINC00304 PIEZO1 ZNF778
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss GALNS TRAPPC2L LOC105371409 CDH15 CBFA2T3 LOC107987238 LOC400558 LOC100129697 ACSF3 PABPN1L APRT LOC101927793 CDT1 LINC00304
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC100129697 GALNS PABPN1L TRAPPC2L LOC105371409 APRT LOC101927793 CDT1 CBFA2T3 LOC107987238
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss RPL13 CENPBD1 TRAPPC2L TUBB3 SPIRE2 MIR4722 CDH15 VPS9D1 SLC22A31 IL17C SNAI3 PABPN1L CTU2 VPS9D1-AS1 LOC101927793 SNORD68 PRDM7 LOC100287036 CDT1 CDK10 SPG7 SPATA2L ZNF778 GALNS URAHP FANCA LOC107987238 CPNE7 ACSF3 CHMP1A APRT TCF25 CYBA GAS8 DPEP1 LINC00304 TUBB8P7 ZNF276 GAS8-AS1 AFG3L1P MC1R MVD LOC100129697 ANKRD11 DBNDD1 LOC339059 LOC100289580 SNAI3-AS1 PIEZO1 LOC105371414 LOC105371409 LOC105371419 SPATA33 CBFA2T3 FAM157C LOC400558 RNF166 DEF8 LOC101927817 LOC107984817
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain GALNS TRAPPC2L LOC105371409 MIR4722 CBFA2T3 LOC107987238 LOC100129697 PABPN1L CTU2 APRT LOC339059 LOC101927793 LOC100289580 CDT1 PIEZO1

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