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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88943519 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07402614_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC107987238 PABPN1L TRAPPC2L PIEZO1 LOC105371409 CDT1 LOC101927793 CBFA2T3 APRT LOC100129697 GALNS
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC105371409 CBFA2T3 LOC100129697
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC100289580 PABPN1L LOC101927793 ZNF778 CDH15 LOC400558 CTU2 LOC107987238 LINC00304 TRAPPC2L MIR4722 PIEZO1 LOC105371409 CDT1 ACSF3 SLC22A31 CBFA2T3 LOC339059 APRT LOC100129697 GALNS
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss PABPN1L LOC101927793 CDH15 LOC400558 LOC107987238 LINC00304 TRAPPC2L LOC105371409 CDT1 ACSF3 SLC22A31 CBFA2T3 APRT LOC100129697 GALNS
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain ANKRD11 LOC100289580 PABPN1L LOC101927793 ZNF778 CDH15 LOC400558 LOC107987238 LOC105371414 LOC100287036 LINC00304 TRAPPC2L PIEZO1 LOC105371409 CDT1 ACSF3 SLC22A31 CBFA2T3 LOC339059 APRT LOC100129697 GALNS
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss PABPN1L LOC101927793 CDH15 LOC400558 LOC107987238 LINC00304 TRAPPC2L LOC105371409 CDT1 ACSF3 CBFA2T3 APRT LOC100129697 GALNS
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC107987238 PABPN1L TRAPPC2L LOC105371409 CDT1 LOC101927793 CBFA2T3 APRT LOC100129697 GALNS
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC100289580 TUBB8P7 PABPN1L PRDM7 GAS8 CDH15 LOC107987238 LOC107984817 SPIRE2 LINC00304 TUBB3 AFG3L1P RPL13 LOC105371409 DPEP1 TCF25 IL17C SNORD68 SPG7 CYBA ZNF276 ZNF778 LOC105371414 SNAI3-AS1 TRAPPC2L SPATA2L CPNE7 CDT1 URAHP SLC22A31 APRT CHMP1A LOC100129697 GALNS SPATA33 FANCA LOC400558 CTU2 FAM157C LOC100287036 DBNDD1 GAS8-AS1 PIEZO1 ACSF3 CENPBD1 LOC339059 VPS9D1 ANKRD11 CDK10 RNF166 MC1R SNAI3 LOC101927793 LOC105371419 DEF8 MVD LOC101927817 MIR4722 VPS9D1-AS1 CBFA2T3
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC100289580 PABPN1L LOC101927793 CTU2 LOC107987238 TRAPPC2L MIR4722 PIEZO1 LOC105371409 CDT1 CBFA2T3 LOC339059 APRT LOC100129697 GALNS

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