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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88943620 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07402814_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss PABPN1L LOC105371409 PIEZO1 CDT1 CBFA2T3 TRAPPC2L GALNS LOC101927793 LOC100129697 LOC107987238 APRT
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain PABPN1L LOC400558 PIEZO1 CDT1 CBFA2T3 TRAPPC2L GALNS LOC100289580 LOC339059 LOC100129697 LOC107987238 APRT LINC00304 ZNF778 MIR4722 SLC22A31 LOC105371409 CTU2 LOC101927793 CDH15 ACSF3
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC105371409 CBFA2T3 LOC100129697
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss PABPN1L LOC400558 CDT1 CBFA2T3 TRAPPC2L GALNS LOC100129697 LOC107987238 APRT LINC00304 SLC22A31 LOC105371409 LOC101927793 CDH15 ACSF3
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain PABPN1L LOC400558 PIEZO1 CDT1 LOC105371414 CBFA2T3 TRAPPC2L GALNS LOC100289580 LOC339059 LOC100129697 LOC107987238 APRT LINC00304 ZNF778 LOC100287036 SLC22A31 LOC105371409 LOC101927793 ANKRD11 CDH15 ACSF3
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion PABPN1L LOC105371409 CDT1 CBFA2T3 TRAPPC2L GALNS LOC101927793 LOC100129697 LOC107987238 APRT
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss PABPN1L LOC400558 CDT1 CBFA2T3 TRAPPC2L GALNS LOC100129697 LOC107987238 APRT LINC00304 LOC105371409 LOC101927793 CDH15 ACSF3
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss GAS8-AS1 PABPN1L LOC400558 CDT1 TRAPPC2L DEF8 LOC339059 ZNF276 URAHP MVD MIR4722 SLC22A31 DPEP1 FAM157C SPG7 CDH15 CDK10 GAS8 CBFA2T3 CENPBD1 LOC100289580 APRT RPL13 FANCA LOC100287036 MC1R SNAI3 VPS9D1-AS1 LOC105371409 PRDM7 SNORD68 LOC107984817 DBNDD1 SNAI3-AS1 SPATA2L TUBB8P7 TUBB3 PIEZO1 LOC107987238 SPIRE2 CHMP1A LOC105371419 CTU2 RNF166 IL17C LOC105371414 GALNS LOC100129697 LINC00304 CPNE7 ZNF778 CYBA AFG3L1P SPATA33 LOC101927793 ANKRD11 TCF25 LOC101927817 VPS9D1 ACSF3
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain PABPN1L PIEZO1 CDT1 CBFA2T3 TRAPPC2L GALNS LOC100289580 LOC339059 LOC100129697 LOC107987238 APRT MIR4722 LOC105371409 CTU2 LOC101927793

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