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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88943753 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07402836_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss PABPN1L LOC107987238 GALNS TRAPPC2L LOC101927793 LOC105371409 LOC100129697 CBFA2T3 APRT CDT1 PIEZO1
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC400558 GALNS TRAPPC2L LOC339059 LOC101927793 LOC105371409 LOC100129697 CBFA2T3 APRT ZNF778 CDT1 LINC00304 PIEZO1 MIR4722 PABPN1L LOC107987238 LOC100289580 SLC22A31 CTU2 CDH15 ACSF3
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC105371409 LOC100129697 CBFA2T3
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss LOC100129697 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LOC400558 GALNS TRAPPC2L LOC101927793 LOC105371409 LOC100129697 CBFA2T3 APRT CDT1 LINC00304 PABPN1L LOC107987238 SLC22A31 CDH15 ACSF3
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC400558 GALNS TRAPPC2L LOC339059 LOC101927793 LOC105371409 ANKRD11 LOC100287036 LOC100129697 CBFA2T3 APRT ZNF778 CDT1 LINC00304 PIEZO1 PABPN1L LOC107987238 LOC100289580 SLC22A31 CDH15 LOC105371414 ACSF3
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC400558 GALNS TRAPPC2L LOC101927793 LOC105371409 LOC100129697 CBFA2T3 APRT CDT1 LINC00304 PABPN1L LOC107987238 CDH15 ACSF3
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion PABPN1L LOC107987238 GALNS TRAPPC2L LOC101927793 LOC105371409 LOC100129697 CBFA2T3 APRT CDT1
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC400558 URAHP SNAI3-AS1 ANKRD11 LOC100287036 CPNE7 LINC00304 DBNDD1 LOC107987238 RPL13 MC1R MVD TUBB8P7 TRAPPC2L FAM157C LOC101927793 APRT MIR4722 CENPBD1 SPG7 VPS9D1-AS1 SPATA2L SPATA33 GAS8 CTU2 LOC105371414 SPIRE2 GAS8-AS1 LOC339059 DEF8 FANCA ZNF778 CDT1 PIEZO1 CDK10 IL17C SLC22A31 TUBB3 CYBA ZNF276 PRDM7 CHMP1A CDH15 LOC101927817 GALNS LOC107984817 VPS9D1 SNAI3 TCF25 AFG3L1P LOC105371409 LOC100129697 CBFA2T3 PABPN1L LOC100289580 RNF166 SNORD68 LOC105371419 DPEP1 ACSF3
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain GALNS TRAPPC2L LOC339059 LOC101927793 LOC105371409 LOC100129697 CBFA2T3 APRT CDT1 PIEZO1 MIR4722 PABPN1L LOC107987238 LOC100289580 CTU2

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