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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88943753 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07402836_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss GALNS APRT LOC101927793 PIEZO1 CDT1 LOC107987238 PABPN1L CBFA2T3 TRAPPC2L LOC100129697 LOC105371409
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain CBFA2T3 LOC100129697 LOC105371409
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LINC00304 ZNF778 APRT CTU2 LOC101927793 MIR4722 PIEZO1 CDT1 LOC107987238 LOC100289580 TRAPPC2L LOC100129697 SLC22A31 GALNS ACSF3 LOC339059 CDH15 PABPN1L LOC400558 CBFA2T3 LOC105371409
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LINC00304 APRT LOC101927793 CDT1 LOC107987238 TRAPPC2L LOC100129697 SLC22A31 GALNS ACSF3 CDH15 PABPN1L LOC400558 CBFA2T3 LOC105371409
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LINC00304 LOC100287036 ZNF778 APRT LOC101927793 PIEZO1 CDT1 LOC107987238 ANKRD11 LOC100289580 TRAPPC2L LOC100129697 SLC22A31 LOC105371414 GALNS ACSF3 LOC339059 CDH15 PABPN1L LOC400558 CBFA2T3 LOC105371409
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion GALNS APRT LOC101927793 CDT1 LOC107987238 PABPN1L CBFA2T3 TRAPPC2L LOC100129697 LOC105371409
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LINC00304 APRT LOC101927793 CDT1 LOC107987238 TRAPPC2L LOC100129697 GALNS ACSF3 CDH15 PABPN1L LOC400558 CBFA2T3 LOC105371409
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss DEF8 ZNF778 APRT CTU2 GAS8 CDK10 ANKRD11 TUBB3 LOC105371414 DBNDD1 GALNS SNORD68 VPS9D1 ACSF3 SPIRE2 TUBB8P7 CPNE7 TCF25 LOC107984817 URAHP MIR4722 MVD PIEZO1 ZNF276 MC1R LOC339059 DPEP1 SPG7 LOC105371419 CDH15 PABPN1L LOC400558 CENPBD1 AFG3L1P SNAI3-AS1 CYBA LOC107987238 PRDM7 TRAPPC2L LOC100129697 RNF166 SNAI3 FANCA RPL13 SPATA33 CHMP1A FAM157C CBFA2T3 IL17C LOC105371409 LINC00304 LOC100287036 LOC101927793 SPATA2L VPS9D1-AS1 CDT1 LOC100289580 SLC22A31 LOC101927817 GAS8-AS1
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain APRT CTU2 LOC101927793 MIR4722 PIEZO1 CDT1 LOC107987238 LOC100289580 TRAPPC2L LOC100129697 GALNS LOC339059 PABPN1L CBFA2T3 LOC105371409

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