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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88943860 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07402847_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss APRT PABPN1L CDT1 LOC107987238 GALNS LOC100129697 LOC105371409 PIEZO1 TRAPPC2L LOC101927793 CBFA2T3
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain APRT PABPN1L SLC22A31 CDH15 GALNS LINC00304 LOC105371409 PIEZO1 LOC100289580 LOC339059 CTU2 ZNF778 CDT1 LOC107987238 MIR4722 ACSF3 LOC100129697 TRAPPC2L LOC101927793 LOC400558 CBFA2T3
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC100129697 LOC105371409 CBFA2T3
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss LOC100129697 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss APRT PABPN1L SLC22A31 CDH15 GALNS LINC00304 LOC105371409 CDT1 LOC107987238 ACSF3 LOC100129697 TRAPPC2L LOC101927793 LOC400558 CBFA2T3
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain APRT PABPN1L SLC22A31 CDH15 GALNS LINC00304 ANKRD11 LOC105371409 PIEZO1 LOC100289580 LOC105371414 LOC339059 ZNF778 CDT1 LOC107987238 LOC100287036 ACSF3 LOC100129697 TRAPPC2L LOC101927793 LOC400558 CBFA2T3
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion APRT PABPN1L CDT1 LOC107987238 GALNS LOC100129697 LOC105371409 TRAPPC2L LOC101927793 CBFA2T3
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss APRT PABPN1L CDH15 GALNS LINC00304 LOC105371409 CDT1 LOC107987238 ACSF3 LOC100129697 TRAPPC2L LOC101927793 LOC400558 CBFA2T3
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss APRT CYBA LOC105371409 CTU2 SNORD68 DBNDD1 LOC107987238 IL17C VPS9D1-AS1 LOC400558 SPATA33 LOC100289580 DEF8 LOC339059 SNAI3 AFG3L1P SNAI3-AS1 URAHP CDK10 LOC100129697 GAS8 CHMP1A PABPN1L SLC22A31 LOC107984817 CDH15 GALNS TCF25 ANKRD11 RNF166 GAS8-AS1 ZNF778 CDT1 SPIRE2 MIR4722 FAM157C ACSF3 CBFA2T3 MVD TUBB8P7 MC1R TUBB3 LINC00304 LOC101927817 PIEZO1 CPNE7 SPATA2L LOC105371414 FANCA ZNF276 PRDM7 CENPBD1 LOC100287036 VPS9D1 SPG7 DPEP1 TRAPPC2L LOC101927793 RPL13 LOC105371419
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain APRT PABPN1L GALNS LOC105371409 PIEZO1 LOC100289580 LOC339059 CTU2 CDT1 LOC107987238 MIR4722 LOC100129697 TRAPPC2L LOC101927793 CBFA2T3

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