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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88943860 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07402847_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC107987238 APRT LOC101927793 PABPN1L CBFA2T3 CDT1 LOC100129697 GALNS LOC105371409 TRAPPC2L PIEZO1
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain CBFA2T3 LOC100129697 LOC105371409
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain CDH15 SLC22A31 LOC400558 LOC101927793 PABPN1L CTU2 LOC100289580 LOC339059 LINC00304 GALNS TRAPPC2L PIEZO1 LOC107987238 ZNF778 APRT CBFA2T3 ACSF3 MIR4722 CDT1 LOC100129697 LOC105371409
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss CDH15 SLC22A31 LOC400558 LOC101927793 PABPN1L LINC00304 GALNS TRAPPC2L LOC107987238 APRT CBFA2T3 ACSF3 CDT1 LOC100129697 LOC105371409
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain CDH15 SLC22A31 LOC400558 ANKRD11 LOC101927793 PABPN1L LOC105371414 LOC100289580 LOC339059 LINC00304 GALNS TRAPPC2L PIEZO1 LOC107987238 ZNF778 APRT CBFA2T3 LOC100287036 ACSF3 CDT1 LOC100129697 LOC105371409
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss CDH15 LOC400558 LOC101927793 PABPN1L LINC00304 GALNS TRAPPC2L LOC107987238 APRT CBFA2T3 ACSF3 CDT1 LOC100129697 LOC105371409
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC107987238 APRT LOC101927793 PABPN1L CBFA2T3 CDT1 LOC100129697 GALNS LOC105371409 TRAPPC2L
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss MC1R LOC101927793 LOC107984817 GALNS PIEZO1 SPATA2L APRT LOC100287036 CDK10 SNORD68 CYBA FANCA FAM157C ANKRD11 DPEP1 LOC101927817 SNAI3 TCF25 CENPBD1 LOC100289580 TUBB8P7 ZNF778 CHMP1A AFG3L1P CBFA2T3 ACSF3 MIR4722 CDT1 URAHP LOC105371409 SPIRE2 SPATA33 LOC400558 MVD LOC105371414 LOC339059 LINC00304 VPS9D1 LOC105371419 TRAPPC2L SNAI3-AS1 GAS8-AS1 TUBB3 IL17C RNF166 CDH15 SLC22A31 RPL13 PABPN1L CTU2 DEF8 PRDM7 GAS8 LOC107987238 DBNDD1 VPS9D1-AS1 SPG7 ZNF276 LOC100129697 CPNE7
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC101927793 PABPN1L CTU2 LOC100289580 LOC339059 GALNS TRAPPC2L PIEZO1 LOC107987238 APRT CBFA2T3 MIR4722 CDT1 LOC100129697 LOC105371409

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