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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88943963 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07403127_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC105371409 CDT1 PIEZO1 TRAPPC2L CBFA2T3 LOC100129697 APRT PABPN1L LOC107987238 LOC101927793 GALNS
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC105371409 CBFA2T3 LOC100129697
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC100289580 CDT1 PIEZO1 CBFA2T3 LOC100129697 SLC22A31 LINC00304 PABPN1L LOC339059 MIR4722 ACSF3 LOC107987238 LOC101927793 CTU2 LOC105371409 ZNF778 CDH15 TRAPPC2L APRT LOC400558 GALNS
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss CDT1 CBFA2T3 LOC100129697 SLC22A31 LINC00304 PABPN1L ACSF3 LOC107987238 LOC101927793 LOC105371409 CDH15 TRAPPC2L APRT LOC400558 GALNS
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC100289580 LOC100287036 CDT1 PIEZO1 CBFA2T3 LOC100129697 SLC22A31 LINC00304 PABPN1L LOC339059 ACSF3 LOC107987238 LOC105371414 LOC101927793 LOC105371409 ZNF778 CDH15 TRAPPC2L APRT ANKRD11 LOC400558 GALNS
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss CDT1 CBFA2T3 LOC100129697 LINC00304 PABPN1L ACSF3 LOC107987238 LOC101927793 LOC105371409 CDH15 TRAPPC2L APRT LOC400558 GALNS
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC105371409 CDT1 TRAPPC2L CBFA2T3 LOC100129697 APRT PABPN1L LOC107987238 LOC101927793 GALNS
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss CBFA2T3 DEF8 ZNF276 VPS9D1-AS1 LOC105371414 URAHP ZNF778 TRAPPC2L CDK10 LOC107984817 RPL13 LOC101927817 RNF166 SPIRE2 CENPBD1 SPATA2L SNAI3-AS1 GAS8 CHMP1A LOC339059 MIR4722 ACSF3 LOC107987238 LOC101927793 TUBB8P7 TUBB3 SPATA33 CPNE7 GALNS LOC100287036 CDT1 PRDM7 PIEZO1 LINC00304 TCF25 LOC105371419 CTU2 AFG3L1P CDH15 SNORD68 GAS8-AS1 FAM157C CYBA LOC100289580 VPS9D1 LOC100129697 SPG7 DPEP1 SLC22A31 IL17C PABPN1L MC1R LOC105371409 SNAI3 DBNDD1 APRT ANKRD11 MVD FANCA LOC400558
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC100289580 CDT1 PIEZO1 CBFA2T3 LOC100129697 PABPN1L LOC339059 MIR4722 LOC107987238 LOC101927793 CTU2 LOC105371409 TRAPPC2L APRT GALNS

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