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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88943963 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07403127_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss CDT1 TRAPPC2L PABPN1L GALNS APRT LOC105371409 LOC100129697 LOC101927793 PIEZO1 CBFA2T3 LOC107987238
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain ACSF3 TRAPPC2L PABPN1L APRT LOC105371409 LOC400558 SLC22A31 LOC100129697 PIEZO1 LOC339059 CBFA2T3 CDH15 LOC107987238 CDT1 LOC100289580 GALNS LINC00304 LOC101927793 ZNF778 CTU2 MIR4722
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC105371409 LOC100129697 CBFA2T3
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss LOC100129697 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss ACSF3 TRAPPC2L PABPN1L APRT LOC105371409 LOC400558 SLC22A31 LOC100129697 CBFA2T3 CDH15 LOC107987238 CDT1 GALNS LINC00304 LOC101927793
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain ACSF3 TRAPPC2L PABPN1L APRT LOC105371409 LOC400558 SLC22A31 LOC100287036 LOC100129697 PIEZO1 LOC339059 CBFA2T3 CDH15 LOC107987238 CDT1 LOC100289580 LOC105371414 GALNS ANKRD11 LINC00304 LOC101927793 ZNF778
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion CDT1 TRAPPC2L PABPN1L GALNS APRT LOC105371409 LOC100129697 LOC101927793 CBFA2T3 LOC107987238
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss ACSF3 TRAPPC2L PABPN1L APRT LOC105371409 LOC400558 LOC100129697 CBFA2T3 CDH15 LOC107987238 CDT1 GALNS LINC00304 LOC101927793
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss APRT CENPBD1 MC1R TUBB3 SPG7 LOC400558 SNAI3 GAS8-AS1 CBFA2T3 CDH15 FANCA LOC100289580 SNAI3-AS1 VPS9D1-AS1 ANKRD11 DBNDD1 SPATA33 ZNF778 SNORD68 VPS9D1 TRAPPC2L PABPN1L FAM157C GAS8 CDK10 TUBB8P7 LOC105371409 URAHP LOC100287036 RNF166 LINC00304 CTU2 MIR4722 ACSF3 MVD TCF25 DEF8 LOC339059 SPATA2L CDT1 LOC105371414 GALNS CYBA LOC101927817 IL17C CHMP1A SPIRE2 DPEP1 PRDM7 SLC22A31 ZNF276 LOC100129697 PIEZO1 AFG3L1P LOC107984817 LOC107987238 RPL13 CPNE7 LOC105371419 LOC101927793
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain TRAPPC2L PABPN1L APRT LOC105371409 LOC100129697 PIEZO1 LOC339059 CBFA2T3 LOC107987238 CDT1 LOC100289580 GALNS LOC101927793 CTU2 MIR4722

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