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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88944413 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07403139_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss PIEZO1 LOC107987238 GALNS APRT CBFA2T3 TRAPPC2L LOC101927793 PABPN1L CDT1 LOC100129697 LOC105371409
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain CBFA2T3 LOC100129697 LOC105371409
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain SLC22A31 ZNF778 LOC107987238 APRT CBFA2T3 TRAPPC2L MIR4722 LOC101927793 CDH15 CTU2 LOC400558 PABPN1L LOC339059 PIEZO1 GALNS LOC100289580 LINC00304 CDT1 ACSF3 LOC100129697 LOC105371409
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss SLC22A31 LOC107987238 APRT CBFA2T3 TRAPPC2L LOC101927793 CDH15 LOC400558 PABPN1L GALNS LINC00304 CDT1 ACSF3 LOC100129697 LOC105371409
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain SLC22A31 ZNF778 LOC107987238 LOC100287036 APRT CBFA2T3 TRAPPC2L LOC101927793 CDH15 LOC105371414 LOC400558 PABPN1L LOC339059 PIEZO1 GALNS LOC100289580 LINC00304 ANKRD11 CDT1 ACSF3 LOC100129697 LOC105371409
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC107987238 GALNS APRT CBFA2T3 TRAPPC2L LOC101927793 PABPN1L CDT1 LOC100129697 LOC105371409
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC107987238 APRT CBFA2T3 TRAPPC2L LOC101927793 CDH15 LOC400558 PABPN1L GALNS LINC00304 CDT1 ACSF3 LOC100129697 LOC105371409
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SLC22A31 ZNF778 LOC107987238 CDK10 LOC100287036 CBFA2T3 LOC400558 PRDM7 ZNF276 LOC100289580 LINC00304 SPATA2L CHMP1A CYBA MC1R CDT1 GAS8-AS1 FAM157C GAS8 MIR4722 LOC101927793 SPIRE2 DPEP1 PABPN1L RPL13 VPS9D1-AS1 SNAI3 ANKRD11 SPATA33 LOC107984817 CDH15 VPS9D1 CTU2 SPG7 DBNDD1 AFG3L1P LOC339059 PIEZO1 RNF166 TCF25 LOC105371419 MVD TUBB8P7 URAHP LOC100129697 DEF8 APRT TRAPPC2L TUBB3 IL17C LOC101927817 SNORD68 CPNE7 LOC105371414 GALNS CENPBD1 FANCA SNAI3-AS1 ACSF3 LOC105371409
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC107987238 APRT CBFA2T3 TRAPPC2L MIR4722 LOC101927793 CTU2 PABPN1L LOC339059 PIEZO1 GALNS LOC100289580 CDT1 LOC100129697 LOC105371409

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