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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88944615 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07403154_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss GALNS CBFA2T3 TRAPPC2L PIEZO1 LOC101927793 LOC107987238 CDT1 LOC100129697 APRT PABPN1L LOC105371409
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain GALNS SLC22A31 ACSF3 PIEZO1 LOC101927793 LOC107987238 APRT CTU2 LOC105371409 CDH15 CBFA2T3 TRAPPC2L LOC100289580 MIR4722 ZNF778 CDT1 LOC100129697 LOC400558 PABPN1L LOC339059 LINC00304
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain CBFA2T3 LOC100129697 LOC105371409
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss GALNS SLC22A31 ACSF3 LOC101927793 LOC107987238 APRT LOC105371409 CDH15 CBFA2T3 TRAPPC2L CDT1 LOC100129697 LOC400558 PABPN1L LINC00304
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain GALNS LOC100287036 SLC22A31 ACSF3 PIEZO1 ANKRD11 LOC101927793 LOC107987238 APRT LOC105371409 CDH15 CBFA2T3 TRAPPC2L LOC100289580 ZNF778 LOC105371414 CDT1 LOC100129697 LOC400558 PABPN1L LOC339059 LINC00304
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion GALNS CBFA2T3 TRAPPC2L LOC101927793 LOC107987238 CDT1 LOC100129697 APRT PABPN1L LOC105371409
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss GALNS ACSF3 LOC101927793 LOC107987238 APRT LOC105371409 CDH15 CBFA2T3 TRAPPC2L CDT1 LOC100129697 LOC400558 PABPN1L LINC00304
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss DPEP1 LOC100287036 AFG3L1P ACSF3 PIEZO1 LOC101927793 CYBA CDH15 TRAPPC2L SPATA33 CDK10 URAHP ZNF778 LOC101927817 SNAI3 RNF166 PABPN1L GALNS PRDM7 CTU2 VPS9D1 LOC105371409 MC1R TCF25 DBNDD1 DEF8 MVD GAS8-AS1 SNORD68 SPATA2L SLC22A31 ANKRD11 SNAI3-AS1 LOC107987238 SPIRE2 SPG7 APRT IL17C CBFA2T3 LOC100289580 TUBB3 VPS9D1-AS1 CPNE7 TUBB8P7 LOC339059 LINC00304 ZNF276 LOC105371419 CENPBD1 CHMP1A MIR4722 FANCA RPL13 LOC105371414 CDT1 LOC100129697 GAS8 FAM157C LOC400558 LOC107984817
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain GALNS PIEZO1 LOC101927793 LOC107987238 APRT CTU2 LOC105371409 CBFA2T3 TRAPPC2L LOC100289580 MIR4722 CDT1 LOC100129697 PABPN1L LOC339059

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