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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88940728 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07403374_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BE676580.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss PIEZO1 TRAPPC2L LOC105371409 CBFA2T3 LOC100129697 LOC101927793 APRT GALNS PABPN1L CDT1 LOC107987238
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LINC00304 ZNF778 MIR4722 CDH15 TRAPPC2L ACSF3 LOC105371409 CBFA2T3 SLC22A31 LOC100129697 APRT PABPN1L PIEZO1 LOC339059 LOC101927793 CTU2 GALNS CDT1 LOC100289580 LOC400558 LOC107987238
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC105371409 CBFA2T3 LOC100129697
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LINC00304 CDH15 TRAPPC2L ACSF3 LOC105371409 CBFA2T3 SLC22A31 LOC100129697 APRT PABPN1L LOC101927793 GALNS CDT1 LOC400558 LOC107987238
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LINC00304 ZNF778 LOC100287036 CDH15 TRAPPC2L ACSF3 LOC105371409 CBFA2T3 SLC22A31 LOC100129697 ANKRD11 APRT PABPN1L PIEZO1 LOC339059 LOC101927793 GALNS CDT1 LOC100289580 LOC105371414 LOC400558 LOC107987238
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion TRAPPC2L LOC105371409 CBFA2T3 LOC100129697 LOC101927793 APRT GALNS PABPN1L CDT1 LOC107987238
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LINC00304 CDH15 TRAPPC2L ACSF3 LOC105371409 CBFA2T3 LOC100129697 APRT PABPN1L LOC101927793 GALNS CDT1 LOC400558 LOC107987238
nsv1071313 Chr.16:88939991 - 88941892 on Build GRCh38 Deletion CBFA2T3 LOC100129697
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss MVD DBNDD1 TRAPPC2L DEF8 ACSF3 SPG7 GAS8 SPATA33 AFG3L1P LOC339059 URAHP FAM157C TUBB8P7 LOC105371414 ZNF276 ZNF778 LOC100287036 LOC107984817 SNAI3 TUBB3 CYBA RNF166 SLC22A31 GAS8-AS1 ANKRD11 APRT PABPN1L SNAI3-AS1 DPEP1 PIEZO1 CENPBD1 LOC101927793 TCF25 LINC00304 SPATA2L RPL13 MIR4722 SNORD68 CBFA2T3 LOC100129697 SPIRE2 IL17C CDK10 LOC101927817 LOC105371419 GALNS CDT1 LOC100289580 LOC400558 LOC107987238 FANCA CDH15 LOC105371409 CPNE7 CHMP1A VPS9D1 MC1R VPS9D1-AS1 CTU2 PRDM7
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain MIR4722 TRAPPC2L LOC105371409 CBFA2T3 LOC100129697 APRT PABPN1L PIEZO1 LOC339059 LOC101927793 CTU2 GALNS CDT1 LOC100289580 LOC107987238

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