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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88940934 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07404729_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BE676580.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC101927793 PABPN1L LOC107987238 TRAPPC2L CDT1 CBFA2T3 LOC105371409 GALNS PIEZO1 LOC100129697 APRT
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LINC00304 CDT1 LOC100289580 MIR4722 CBFA2T3 LOC105371409 GALNS LOC400558 LOC101927793 PABPN1L SLC22A31 CDH15 LOC107987238 TRAPPC2L CTU2 ZNF778 ACSF3 PIEZO1 LOC100129697 APRT LOC339059
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain CBFA2T3 LOC105371409 LOC100129697
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LINC00304 CDT1 CBFA2T3 LOC105371409 GALNS LOC400558 LOC101927793 PABPN1L SLC22A31 CDH15 LOC107987238 TRAPPC2L ACSF3 LOC100129697 APRT
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LINC00304 LOC105371414 CDT1 LOC100289580 CBFA2T3 LOC105371409 GALNS LOC400558 LOC101927793 PABPN1L SLC22A31 CDH15 LOC107987238 TRAPPC2L ZNF778 ANKRD11 ACSF3 LOC100287036 PIEZO1 LOC100129697 APRT LOC339059
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC101927793 PABPN1L LOC107987238 TRAPPC2L CDT1 CBFA2T3 LOC105371409 GALNS LOC100129697 APRT
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LINC00304 CDT1 CBFA2T3 LOC105371409 GALNS LOC400558 LOC101927793 PABPN1L CDH15 LOC107987238 TRAPPC2L ACSF3 LOC100129697 APRT
nsv1071313 Chr.16:88939991 - 88941892 on Build GRCh38 Deletion CBFA2T3 LOC100129697
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LINC00304 FANCA LOC105371414 DPEP1 PRDM7 SLC22A31 LOC105371419 CPNE7 FAM157C GAS8 MVD ACSF3 CYBA VPS9D1-AS1 LOC101927817 CHMP1A CBFA2T3 LOC105371409 CDK10 MC1R LOC101927793 URAHP LOC107984817 SPG7 CDH15 CTU2 SPIRE2 SNORD68 VPS9D1 RPL13 TCF25 GAS8-AS1 IL17C SPATA2L AFG3L1P GALNS SNAI3 LOC400558 PABPN1L LOC107987238 TRAPPC2L ZNF778 LOC100287036 PIEZO1 LOC339059 TUBB3 CDT1 LOC100289580 MIR4722 ZNF276 CENPBD1 SPATA33 RNF166 TUBB8P7 SNAI3-AS1 ANKRD11 DBNDD1 LOC100129697 APRT DEF8
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain CDT1 LOC100289580 MIR4722 CBFA2T3 LOC105371409 GALNS LOC101927793 PABPN1L LOC107987238 TRAPPC2L CTU2 PIEZO1 LOC100129697 APRT LOC339059

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