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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88941072 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07404985_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 1 129 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 1 129 BAA29062.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BE676580.1 1 129
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss PABPN1L LOC105371409 TRAPPC2L PIEZO1 LOC101927793 LOC107987238 CBFA2T3 GALNS LOC100129697 CDT1 APRT
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC101927793 LOC100129697 MIR4722 LOC400558 LOC100289580 PABPN1L ACSF3 LOC105371409 TRAPPC2L PIEZO1 SLC22A31 LOC107987238 LOC339059 CTU2 CBFA2T3 CDH15 GALNS LINC00304 ZNF778 CDT1 APRT
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain LOC105371409 CBFA2T3 LOC100129697
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LOC101927793 LOC100129697 LOC400558 PABPN1L ACSF3 LOC105371409 TRAPPC2L SLC22A31 LOC107987238 CBFA2T3 CDH15 GALNS LINC00304 CDT1 APRT
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC105371414 LOC101927793 LOC100129697 LOC400558 LOC100289580 PABPN1L ACSF3 ANKRD11 LOC105371409 TRAPPC2L PIEZO1 SLC22A31 LOC107987238 LOC339059 CBFA2T3 LOC100287036 CDH15 GALNS LINC00304 ZNF778 CDT1 APRT
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion PABPN1L LOC105371409 TRAPPC2L LOC101927793 LOC107987238 CBFA2T3 GALNS LOC100129697 CDT1 APRT
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC101927793 LOC100129697 LOC400558 PABPN1L ACSF3 LOC105371409 TRAPPC2L LOC107987238 CBFA2T3 CDH15 GALNS LINC00304 CDT1 APRT
nsv1071313 Chr.16:88939991 - 88941892 on Build GRCh38 Deletion CBFA2T3 LOC100129697
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss DBNDD1 RNF166 LOC100129697 SPIRE2 LOC100289580 LOC105371409 CPNE7 PRDM7 SLC22A31 LOC107984817 MC1R CBFA2T3 FAM157C LINC00304 LOC105371419 LOC101927817 SNAI3 LOC105371414 SPG7 URAHP LOC101927793 GAS8 VPS9D1 IL17C CENPBD1 LOC400558 PABPN1L ANKRD11 PIEZO1 CYBA CTU2 LOC100287036 CDH15 MVD ZNF778 SPATA2L VPS9D1-AS1 DEF8 MIR4722 CHMP1A TUBB3 ACSF3 TRAPPC2L SNORD68 GAS8-AS1 TCF25 LOC107987238 LOC339059 RPL13 CDT1 APRT ZNF276 TUBB8P7 SNAI3-AS1 FANCA AFG3L1P DPEP1 SPATA33 CDK10 GALNS
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC101927793 LOC100129697 MIR4722 LOC100289580 PABPN1L LOC105371409 TRAPPC2L PIEZO1 LOC107987238 LOC339059 CTU2 CBFA2T3 GALNS CDT1 APRT

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