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See other CPTP CNV Assays ›
Gene Symbol
CPTP
Assay Reference Genome
Location

Chr.1:1325176 on build GRCh38
Cytoband
1p36.33
Assay ID Hs07476875_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 80772

Gene Name:

 ceramide-1-phosphate transfer protein

Gene Aliases:

 GLTPD1

Location:

 Chr.1:1324756-1328896 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPTP NM_001029885.1 NP_001025056.1
XM_005244801.3 XP_005244858.1
XM_005244802.1 XP_005244859.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss SDF4 TTLL10 MIR1302-2 OR4F5 LOC105378591 MTND1P23 RNF223 PUSL1 FAM41C CDK11B LINC00115 LOC100288175 ATAD3B PLEKHN1 LOC107985729 FNDC10 NOC2L LOC100133331 TMEM52 ATAD3A B3GALT6 LOC100132287 AGRN CCNL2 ISG15 FAM138A MRPL20 TAS1R3 CDK11A SLC35E2B LOC100506504 ACAP3 HES4 C1orf159 TTLL10-AS1 SAMD11 CFAP74 DDX11L1 LOC105378949 SCNN1D MXRA8 MIR200B MIR6726 LOC105378948 SSU72 LOC102725121 AURKAIP1 LOC105378589 FAM87B LOC100129534 LOC105378947 SKI LOC100287934 KLHL17 DVL1 TMEM88B GABRD LOC729737 CPSF3L LOC100288069 VWA1 MIR6727 GNB1 CALML6 ANKRD65 MIR6859-2 TNFRSF4 PERM1 LOC284600 MMP23A WASH7P OR4F16 UBE2J2 ATAD3C LINC01128 NADK LOC107985728 LINC01342 MORN1 CPTP TMEM240 MIR6859-1 MIB2 LOC102724312 LOC105378592 MTND2P28 MIR200A TNFRSF18 MIR429 LOC101928626 LOC107984841 LOC148413 SLC35E2 MMP23B MIR6723 FAAP20 FAM132A LOC100130417 OR4F29 PRKCZ MIR6808 LOC100134822
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss PUSL1 CPSF3L MIR6726 MIR6727 MIR6808 CPTP ACAP3 DVL1 TAS1R3
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss PUSL1 CPSF3L MIR6726 MIR6727 MIR6808 CPTP SCNN1D ACAP3 DVL1 TAS1R3 MXRA8 AURKAIP1
dgv7n100 Chr.1:1306835 - 1379057 on Build GRCh38 Loss PUSL1 CPSF3L MIR6727 MIR6808 CPTP ACAP3 DVL1 TAS1R3 MXRA8 AURKAIP1
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss UBE2J2 LINC01342 CPTP TAS1R3 SDF4 TTLL10 MIR200A TNFRSF18 ACAP3 DVL1 MIR429 RNF223 PUSL1 C1orf159 TTLL10-AS1 CPSF3L MIR6727 SCNN1D FAM132A MXRA8 TNFRSF4 MIR200B MIR6726 MIR6808 B3GALT6 AURKAIP1
dgv6n100 Chr.1:1301750 - 1362354 on Build GRCh38 Gain+Loss PUSL1 CPSF3L MIR6727 MIR6808 CPTP ACAP3 DVL1 TAS1R3 MXRA8
esv3584992 Chr.1:1314419 - 1330342 on Build GRCh38 Gain CPSF3L CPTP
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication UBE2J2 AGRN LINC01342 CPTP TAS1R3 SDF4 TTLL10 MIR200A TNFRSF18 ACAP3 MIR429 RNF223 PUSL1 C1orf159 TTLL10-AS1 CPSF3L MIR6727 LOC100288175 SCNN1D FAM132A TNFRSF4 MIR200B MIR6726 LOC105378948 B3GALT6
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion PUSL1 CPSF3L MIR6726 MIR6727 MIR6808 CPTP SCNN1D ACAP3 DVL1 TAS1R3 MXRA8 AURKAIP1
dgv26n54 Chr.1:1321172 - 1351426 on Build GRCh38 Loss CPSF3L MIR6808 CPTP DVL1 TAS1R3
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss FAM87B SDF4 TTLL10 LOC100287934 KLHL17 DVL1 TMEM88B RNF223 PUSL1 CPSF3L FAM41C CDK11B LINC00115 LOC100288069 VWA1 MIR6727 LOC100288175 ATAD3B PLEKHN1 LOC107985729 ANKRD65 FNDC10 TNFRSF4 PERM1 NOC2L LOC284600 MMP23A ATAD3A B3GALT6 UBE2J2 ATAD3C LINC01128 NADK AGRN LOC107985728 CCNL2 ISG15 LINC01342 CPTP MRPL20 TAS1R3 TMEM240 CDK11A SLC35E2B MIB2 LOC102724312 MIR200A TNFRSF18 ACAP3 HES4 MIR429 C1orf159 TTLL10-AS1 LOC148413 SAMD11 SLC35E2 MMP23B SCNN1D FAM132A LOC100130417 MXRA8 MIR200B MIR6726 LOC105378948 SSU72 MIR6808 AURKAIP1
esv3890636 Chr.1:1304555 - 1353203 on Build GRCh38 Loss PUSL1 CPSF3L MIR6727 MIR6808 CPTP ACAP3 DVL1 TAS1R3 MXRA8
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion UBE2J2 ATAD3C CCNL2 LINC01342 CPTP MRPL20 TAS1R3 SDF4 TMEM240 TTLL10 MIB2 LOC102724312 MIR200A TNFRSF18 ACAP3 DVL1 TMEM88B MIR429 PUSL1 C1orf159 TTLL10-AS1 LOC148413 CPSF3L CDK11B VWA1 MIR6727 MMP23B SCNN1D ATAD3B LOC107985729 FAM132A MXRA8 ANKRD65 FNDC10 TNFRSF4 MIR200B MIR6726 SSU72 MIR6808 ATAD3A B3GALT6 AURKAIP1
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain PUSL1 CPSF3L MIR6726 MIR6727 MIR6808 CPTP SCNN1D ACAP3 DVL1 TAS1R3 MXRA8
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss UBE2J2 PUSL1 CPSF3L MIR6727 CPTP SCNN1D TAS1R3 MXRA8 MIR6726 MIR6808 ACAP3 DVL1 AURKAIP1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain UBE2J2 AGRN LOC107985728 CCNL2 ISG15 LINC01342 CPTP MRPL20 TAS1R3 SDF4 TTLL10 MIR200A TNFRSF18 KLHL17 ACAP3 HES4 DVL1 TMEM88B MIR429 RNF223 PUSL1 C1orf159 TTLL10-AS1 LOC148413 CPSF3L SAMD11 MIR6727 LOC100288175 SCNN1D PLEKHN1 FAM132A LOC100130417 MXRA8 ANKRD65 TNFRSF4 MIR200B PERM1 MIR6726 LOC105378948 NOC2L MIR6808 LOC284600 B3GALT6 AURKAIP1

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