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See other CPTP CNV Assays ›
Gene Symbol
CPTP
Assay Reference Genome
Location

Chr.1:1325053 on build GRCh38
Cytoband
1p36.33
Assay ID Hs07480168_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 80772

Gene Name:

 ceramide-1-phosphate transfer protein

Gene Aliases:

 GLTPD1

Location:

 Chr.1:1324756-1328896 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 1 - Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPTP NM_001029885.1 NP_001025056.1
XM_005244802.1 XP_005244859.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss TNFRSF18 MIR200A MMP23B LINC00115 PUSL1 ANKRD65 LOC148413 ATAD3A LOC107985729 MIR6727 MIR429 GNB1 MIR6726 TMEM52 TMEM88B MIR1302-2 FAM138A SAMD11 MIR6723 LOC100506504 FAM132A ATAD3C TNFRSF4 LOC100130417 OR4F29 VWA1 MRPL20 TAS1R3 TTLL10-AS1 RNF223 SKI LOC105378947 LINC01342 SCNN1D NOC2L UBE2J2 CCNL2 DDX11L1 FAAP20 LOC105378589 LOC100287934 MTND2P28 LOC105378949 B3GALT6 CPSF3L FAM87B ATAD3B TTLL10 LOC284600 CFAP74 PRKCZ LOC100288175 CALML6 SLC35E2B SSU72 PLEKHN1 LOC107985728 ACAP3 MIR200B MIR6808 ISG15 OR4F5 MIB2 CPTP CDK11A NADK LOC105378591 LOC729737 KLHL17 AURKAIP1 FAM41C FNDC10 DVL1 LOC100288069 OR4F16 TMEM240 LOC101928626 MXRA8 LOC107984841 CDK11B MIR6859-1 LOC100132287 MTND1P23 LINC01128 GABRD AGRN LOC102724312 LOC100133331 LOC105378592 HES4 LOC102725121 SDF4 LOC100129534 WASH7P MMP23A MIR6859-2 SLC35E2 PERM1 C1orf159 MORN1 LOC100134822 LOC105378948
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss CPSF3L ACAP3 MIR6727 MIR6808 MIR6726 PUSL1 CPTP TAS1R3 DVL1
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss CPSF3L MXRA8 ACAP3 MIR6727 MIR6808 SCNN1D MIR6726 AURKAIP1 PUSL1 CPTP TAS1R3 DVL1
dgv7n100 Chr.1:1306835 - 1379057 on Build GRCh38 Loss CPSF3L MXRA8 ACAP3 MIR6727 MIR6808 AURKAIP1 PUSL1 CPTP TAS1R3 DVL1
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss TNFRSF18 TNFRSF4 MIR200A TTLL10 PUSL1 TAS1R3 TTLL10-AS1 RNF223 ACAP3 MIR200B MIR6727 LINC01342 MIR6808 SCNN1D CPTP UBE2J2 SDF4 MIR429 MIR6726 AURKAIP1 DVL1 B3GALT6 CPSF3L MXRA8 C1orf159 FAM132A
dgv6n100 Chr.1:1301750 - 1362354 on Build GRCh38 Gain+Loss CPSF3L MXRA8 ACAP3 MIR6727 MIR6808 PUSL1 CPTP TAS1R3 DVL1
esv3584992 Chr.1:1314419 - 1330342 on Build GRCh38 Gain CPSF3L CPTP
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication TNFRSF18 TNFRSF4 MIR200A TTLL10 LOC100288175 PUSL1 TAS1R3 TTLL10-AS1 AGRN RNF223 ACAP3 MIR200B MIR6727 LINC01342 SCNN1D CPTP UBE2J2 SDF4 MIR429 MIR6726 B3GALT6 CPSF3L C1orf159 FAM132A LOC105378948
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion CPSF3L MXRA8 ACAP3 MIR6727 MIR6808 SCNN1D MIR6726 AURKAIP1 PUSL1 CPTP TAS1R3 DVL1
dgv26n54 Chr.1:1321172 - 1351426 on Build GRCh38 Loss CPSF3L MIR6808 CPTP TAS1R3 DVL1
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss TNFRSF18 MIR200A TTLL10 LOC284600 MMP23B LINC00115 LOC100288175 PUSL1 ANKRD65 LOC148413 SLC35E2B SSU72 ATAD3A LOC107985729 PLEKHN1 LOC107985728 ACAP3 MIR200B MIR6727 MIR6808 ISG15 MIB2 CPTP CDK11A NADK MIR429 KLHL17 MIR6726 AURKAIP1 FAM41C TMEM88B FNDC10 DVL1 LOC100288069 TMEM240 MXRA8 SAMD11 FAM132A ATAD3C CDK11B TNFRSF4 LOC100130417 VWA1 MRPL20 LINC01128 TAS1R3 TTLL10-AS1 AGRN RNF223 LOC102724312 LINC01342 HES4 SCNN1D NOC2L UBE2J2 CCNL2 SDF4 MMP23A LOC100287934 B3GALT6 CPSF3L SLC35E2 FAM87B PERM1 C1orf159 ATAD3B LOC105378948
esv3890636 Chr.1:1304555 - 1353203 on Build GRCh38 Loss CPSF3L MXRA8 ACAP3 MIR6727 MIR6808 PUSL1 CPTP TAS1R3 DVL1
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion CDK11B TNFRSF18 TNFRSF4 MIR200A TTLL10 MMP23B VWA1 MRPL20 PUSL1 ANKRD65 LOC148413 TAS1R3 SSU72 ATAD3A TTLL10-AS1 LOC102724312 LOC107985729 ACAP3 MIR200B MIR6727 LINC01342 MIR6808 SCNN1D MIB2 CPTP UBE2J2 CCNL2 SDF4 MIR429 MIR6726 AURKAIP1 TMEM88B FNDC10 DVL1 TMEM240 B3GALT6 CPSF3L MXRA8 C1orf159 FAM132A ATAD3C ATAD3B
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain CPSF3L MXRA8 ACAP3 MIR6727 MIR6808 SCNN1D MIR6726 PUSL1 CPTP TAS1R3 DVL1
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss MIR6726 AURKAIP1 PUSL1 TAS1R3 DVL1 CPSF3L MXRA8 ACAP3 MIR6727 MIR6808 SCNN1D CPTP UBE2J2
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain TNFRSF18 TNFRSF4 MIR200A LOC100130417 TTLL10 LOC284600 MRPL20 LOC100288175 PUSL1 ANKRD65 LOC148413 TAS1R3 TTLL10-AS1 AGRN RNF223 PLEKHN1 LOC107985728 ACAP3 MIR200B MIR6727 LINC01342 MIR6808 HES4 SCNN1D ISG15 NOC2L CPTP UBE2J2 CCNL2 SDF4 MIR429 KLHL17 MIR6726 AURKAIP1 TMEM88B DVL1 B3GALT6 CPSF3L MXRA8 PERM1 SAMD11 C1orf159 FAM132A LOC105378948

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