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See other PRMT1 CNV Assays ›
Gene Symbol
PRMT1
Assay Reference Genome
Location

Chr.19:49677041 on build GRCh38
Cytoband
19q13.33
Assay ID Hs07536935_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 3276

Gene Name:

 protein arginine methyltransferase 1

Gene Aliases:

 ANM1, HCP1, HRMT1L2, IR1B4

Location:

 Chr.19:49676166-49688450 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRMT1 XM_017026735.1 XP_016882224.1
XM_017026736.1 XP_016882225.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss ADM5 PRMT1 CPT1C PRR12 RRAS BCL2L12 MIR5088 NOSIP PRRG2 IRF3 SCAF1
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss ADM5 PRMT1 CPT1C PRR12 RRAS BCL2L12 MIR5088 NOSIP PRRG2 IRF3 SCAF1
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss SNORD33 CGB7 SNAR-A9 SNAR-A2 SNORD35A BAX CABP5 SNORD32A GRIN2D PRR12 BCL2L12 LIN7B PTH2 PTOV1-AS2 SNAR-A13 SNAR-A7 SLC6A16 KCNJ14 RPL18 DHDH MIR4324 SNAR-A10 SLC17A7 CARD8 AP2A1 CCDC114 CGB2 PLA2G4C MIR4751 BSPH1 PLEKHA4 RPL13A MIR6800 SNAR-C2 FUT2 BCAT2 MIR6799 CGB5 ZNF473 AKT1S1 FLJ26850 TRPM4 HSD17B14 SNRNP70 MED25 SEC1P DKKL1 RPS11 SNAR-C1 TEAD2 GYS1 CGB3 LIG1 HRC C19orf68 DBP RRAS SNAR-G1 TULP2 SIGLEC11 SYNGR4 SULT2B1 TSKS SIGLEC16 SNORD35B IZUMO1 ZNF114 RASIP1 FUT1 NOSIP C19orf73 CYTH2 VRK3 CA11 CCDC155 SNAR-C4 NTN5 LOC101059948 PRMT1 LMTK3 MIR4750 SNAR-A11 SNAR-G2 GRWD1 LHB EMP3 SNAR-A4 SPHK2 MIR4749 CGB8 IL4I1 ELSPBP1 RCN3 PNKP ALDH16A1 SNAR-B1 CD37 FAM83E LOC101928295 PTOV1 SNAR-A8 PPP1R15A SNAR-A3 TBC1D17 MIR5088 FCGRT CARD8-AS1 SNAR-A1 KCNA7 SNORD34 LOC105447645 MAMSTR LOC100287477 IRF3 GFY ADM5 NUCB1 CGB1 PIH1D1 LOC105372430 SNAR-B2 FUZ NUP62 NTF4 MIR150 PTOV1-AS1 KDELR1 PRRG2 FLT3LG PLA2G4C-AS1 MIR6798 FGF21 SNAR-A5 SCAF1 SPACA4 PPFIA3 CPT1C RUVBL2 SNAR-D SNAR-A14 FTL SNAR-C3 SNAR-A12 NUCB1-AS1 SNAR-C5 TMEM143 SNAR-A6 ATF5
esv24796 Chr.19:49676714 - 49677194 on Build GRCh38 Loss PRMT1
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain ADM5 PRMT1 CPT1C PRR12 RRAS BCL2L12 MIR5088 IRF3 SCAF1
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion MIR6799 AKT1S1 IRF3 ADM5 MED25 PRMT1 PRR12 MIR4750 BCL2L12 PTOV1-AS2 FUZ NUP62 PTOV1-AS1 PRRG2 MIR4749 RRAS IL4I1 AP2A1 PNKP SCAF1 MIR4751 CPT1C TSKS PTOV1 TBC1D17 MIR6800 MIR5088 NOSIP ATF5
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain ADM5 PRMT1 CPT1C PRR12 RRAS BCL2L12 MIR5088 NOSIP PRRG2 IRF3 SCAF1
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion SNORD33 MIR6799 SNORD35A SNORD34 IRF3 SNORD32A ADM5 MED25 PRMT1 PRR12 RPS11 BCL2L12 FUZ MIR150 PTOV1-AS1 PRRG2 RRAS AP2A1 RCN3 SCAF1 CPT1C TSKS SNORD35B RPL13A MIR6800 MIR5088 NOSIP FCGRT
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss PRMT1 PRR12 RRAS BCL2L12 NOSIP PRRG2 IRF3 SCAF1

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More Information


Additional Information:

For this assay, SNP(s) [rs117039051] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

protein modifying enzyme

Gene Ontology Categories:

Function(s) Process(es)


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