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See other PRMT1 CNV Assays ›
Gene Symbol
PRMT1
Assay Reference Genome
Location

Chr.19:49677041 on build GRCh38
Cytoband
19q13.33
Assay ID Hs07536935_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 3276

Gene Name:

 protein arginine methyltransferase 1

Gene Aliases:

 ANM1, HCP1, HRMT1L2, IR1B4

Location:

 Chr.19:49676166-49688450 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRMT1 XM_017026735.1 XP_016882224.1
XM_017026736.1 XP_016882225.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss ADM5 IRF3 PRR12 PRRG2 MIR5088 CPT1C SCAF1 BCL2L12 PRMT1 RRAS NOSIP
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss ADM5 IRF3 PRR12 PRRG2 MIR5088 CPT1C SCAF1 BCL2L12 PRMT1 RRAS NOSIP
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss SNORD35B SNAR-C5 CGB3 BSPH1 LOC101928295 FUZ IZUMO1 TSKS RPS11 SEC1P KCNJ14 CGB1 MIR4751 PTOV1 BCL2L12 RUVBL2 FLJ26850 IRF3 SNAR-B1 PTH2 NTF4 CCDC114 SNRNP70 DBP SNORD35A SPACA4 GYS1 SYNGR4 FTL CYTH2 ELSPBP1 KCNA7 NUP62 MIR4324 ALDH16A1 LOC105447645 SNAR-C1 SULT2B1 GRIN2D GFY LMTK3 SNAR-A4 PTOV1-AS1 MED25 TEAD2 CPT1C C19orf73 AKT1S1 NTN5 GRWD1 SNAR-G2 SNAR-A14 PNKP RASIP1 SNAR-A8 MIR4749 TMEM143 SNAR-C3 SNAR-A13 ZNF114 MIR6798 SCAF1 CD37 MAMSTR SNAR-B2 CABP5 MIR150 PRR12 SIGLEC16 SIGLEC11 SNAR-D TBC1D17 SNAR-A3 PRMT1 SNAR-G1 BAX IL4I1 SNAR-A5 LOC105372430 CA11 SNAR-A10 SPHK2 HSD17B14 SNAR-C4 ZNF473 DHDH SLC17A7 PLA2G4C SNORD34 FUT1 SNORD32A SNAR-A1 FGF21 LOC101059948 PLA2G4C-AS1 SNAR-A11 FUT2 NUCB1 TULP2 PPP1R15A RPL18 RPL13A MIR5088 SNORD33 LIN7B LOC100287477 SNAR-A12 FCGRT EMP3 ADM5 CGB2 SNAR-A6 KDELR1 LIG1 SLC6A16 MIR4750 RRAS PIH1D1 SNAR-C2 CGB5 PRRG2 PLEKHA4 PPFIA3 LHB CGB7 NUCB1-AS1 ATF5 TRPM4 SNAR-A9 HRC SNAR-A2 MIR6799 CGB8 AP2A1 DKKL1 BCAT2 C19orf68 RCN3 VRK3 FAM83E CARD8-AS1 MIR6800 SNAR-A7 CARD8 PTOV1-AS2 NOSIP FLT3LG CCDC155
nsv470150 Chr.19:49618821 - 49856789 on Build GRCh38 Gain ADM5 IRF3 PRR12 MIR6799 PRMT1 RRAS MIR4749 AP2A1 FUZ TSKS PTOV1-AS1 MED25 PTOV1 MIR5088 CPT1C SCAF1 BCL2L12 MIR6800 PTOV1-AS2
esv24796 Chr.19:49676714 - 49677194 on Build GRCh38 Loss PRMT1
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain ADM5 IRF3 PRR12 PRRG2 MIR5088 CPT1C SCAF1 BCL2L12 PRMT1 RRAS NOSIP
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion ADM5 PRR12 TBC1D17 PRMT1 MIR4750 RRAS IL4I1 FUZ TSKS PTOV1-AS1 PRRG2 MIR4751 MED25 PTOV1 CPT1C BCL2L12 AKT1S1 IRF3 ATF5 PNKP MIR6799 MIR4749 AP2A1 MIR5088 SCAF1 NUP62 MIR6800 PTOV1-AS2 NOSIP
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion SNORD35B ADM5 MIR150 PRR12 PRMT1 RRAS FUZ TSKS RPS11 PTOV1-AS1 PRRG2 MED25 CPT1C BCL2L12 IRF3 SNORD34 SNORD35A MIR6799 SNORD32A AP2A1 RCN3 RPL13A MIR5088 SNORD33 SCAF1 MIR6800 NOSIP FCGRT
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss IRF3 PRR12 PRRG2 SCAF1 BCL2L12 PRMT1 RRAS NOSIP

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More Information


Additional Information:

For this assay, SNP(s) [rs117039051] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

protein modifying enzyme

Gene Ontology Categories:

Function(s) Process(es)


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