rno478519_mir

Specificity testing was performed using rat anti-targets.

Assay Name:	rno-miR-99a-5p
Stem-loop Accession Number:	MI0000101
miRBase Version:	v22.1
Chromosome Location:	Chr.21: 16539089 - 16539169 [+] on Build GRCh38
Mature miRNA Sequence:	AACCCGUAGAUCCGAUCUUGUG
Species:	Human, Mouse, Rat, Alligator mississippiensis, Anolis carolinensis, Chicken, Chrysemys picta, Columba livia, Dasypus novemcinctus, Gadus morhua, Gorilla gorilla, Guinea pig, Horse, Ictalurus punctatus, Lagothrix lagotricha, Macaca nemestrina, Metriaclima zebra, Microcebus murinus, Neolamprologus brichardi, Ophiophagus hannah, Oreochromis niloticus, Pan paniscus, Pan troglodytes, Pig, Pongo pygmaeus, Pundamilia nyererei, Rabbit, Rhesus monkey, Salmo salar, Tupaia chinensis, Xenopus tropicalis, Zebrafish
Product Type:	TaqMan^™ Advanced miRNA Assay

Assay Details

• Gene Family ID: MIPF0000033, mir-10

• Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG

miRBase Details:

Species	miRBase ID	miRBase Accession Number
Human	hsa-miR-99a-5p	MIMAT0000097
Mouse	mmu-miR-99a-5p	MIMAT0000131
Rat	rno-miR-99a-5p	MIMAT0000820
Alligator mississippiensis	ami-miR-99a-5p	MIMAT0038110
Anolis carolinensis	aca-miR-99a-5p	MIMAT0021996
Chicken	gga-miR-99a-5p	MIMAT0001103
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Chrysemys picta	cpi-miR-99a-5p	MIMAT0037710
Columba livia	cli-miR-99-5p	MIMAT0038478
Dasypus novemcinctus	dno-miR-99a-5p	MIMAT0047594
Gadus morhua	gmo-miR-99-5p	MIMAT0044269
Gorilla gorilla	ggo-miR-99a	MIMAT0002412
Guinea pig	cpo-miR-99a-5p	MIMAT0046941
Horse	eca-miR-99a	MIMAT0013184
Ictalurus punctatus	ipu-miR-99a	MIMAT0029532
Lagothrix lagotricha	lla-miR-99a	MIMAT0002414
Macaca nemestrina	mne-miR-99a	MIMAT0002415
Metriaclima zebra	mze-miR-99b	MIMAT0042328
Microcebus murinus	mmr-miR-99a	MIMAT0049202
Neolamprologus brichardi	nbr-miR-99b	MIMAT0042505
Ophiophagus hannah	oha-miR-99a-5p	MIMAT0036964
Oreochromis niloticus	oni-miR-99b	MIMAT0042695
Pan paniscus	ppa-miR-99a	MIMAT0002416
Pan troglodytes	ptr-miR-99a	MIMAT0002411
Pig	ssc-miR-99a-5p	MIMAT0013896
Pongo pygmaeus	ppy-miR-99a	MIMAT0002413
Pundamilia nyererei	pny-miR-99b	MIMAT0042888
Rabbit	ocu-miR-99a-5p	MIMAT0048182
Rhesus monkey	mml-miR-99a-5p	MIMAT0002410
Salmo salar	ssa-miR-99-5p	MIMAT0032718
Tupaia chinensis	tch-miR-99a-5p	MIMAT0036563
Xenopus tropicalis	xtr-miR-99	MIMAT0003582
Zebrafish	dre-miR-99	MIMAT0001812

Stem-loop Details

Human

Stem-loop ID	hsa-mir-99a
Stem-loop Accession #	MI0000101
Stem-loop Sequence	CCCAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCACAAGCUCGCUUCUAUGGGUCUGUGUCAGUGUG
Chromosome Location	Chr. 21 - 16539089 - 16539169 [+] on Build GRCh38
Mature MicroRNA	miRBase Accession #: MIMAT0000097 miRBase ID: hsa-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: Chr. 21 - 16539089 - 16539169 [+] on Build GRCh38

Mouse

Stem-loop ID	mmu-mir-99a
Stem-loop Accession #	MI0000146
Stem-loop Sequence	CAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCGCAAGCUCGUUUCUAUGGGUCUGUG
Chromosome Location	Chr. 16 - 77598936 - 77599000 [+] on Build GRCm38
Mature MicroRNA	miRBase Accession #: MIMAT0000131 miRBase ID: mmu-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: Chr. 16 - 77598936 - 77599000 [+] on Build GRCm38

Rat

Stem-loop ID	rno-mir-99a
Stem-loop Accession #	MI0000883
Stem-loop Sequence	CCCAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCACAAGCUCGUUUCUAUGGGUCUGUGGCAGUGUG
Chromosome Location	Chr. 11 - 16052153 - 16052233 [+] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0000820 miRBase ID: rno-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: Chr. 11 - 16052153 - 16052233 [+] on Build Rnor_6.0

Alligator mississippiensis

Stem-loop ID	ami-mir-99a
Stem-loop Accession #	MI0029708
Stem-loop Sequence	GUGCCAGUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUAAAAUACACCACACAAGCUCGCUUCUAUGGGUCUGUGUCAGUGUGGUUAUC
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0038110 miRBase ID: ami-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Anolis carolinensis

Stem-loop ID	aca-mir-99a
Stem-loop Accession #	MI0018894
Stem-loop Sequence	GGCAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUAUAAUGCACAAGCUCGCUUCUAUGGGUCUGUGUC
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0021996 miRBase ID: aca-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Chicken

Stem-loop ID	gga-mir-99a
Stem-loop Accession #	MI0001173
Stem-loop Sequence	CCAAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGUUGAAAUGCACUGCACAAGCUCGCUUCUAUGGGUCUGUGUCAGUAUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0001103 miRBase ID: gga-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Chrysemys picta

Stem-loop ID	cpi-mir-99a
Stem-loop Accession #	MI0029444
Stem-loop Sequence	UGGUGCCAAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUAAAGUAUACUGCACAAGCUCGCUUCUAUGGGUCUGUGUCACUCUGGUGAUCU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0037710 miRBase ID: cpi-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Columba livia

Stem-loop ID	cli-mir-99
Stem-loop Accession #	MI0029945
Stem-loop Sequence	GAUGCCAAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGUUGAAACGCACUGCACAAGCUCGCUUCUAUGGGUCUGUGUCAGUAUGGUGAUC
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0038478 miRBase ID: cli-miR-99-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Dasypus novemcinctus

Stem-loop ID	dno-mir-99a
Stem-loop Accession #	MI0038954
Stem-loop Sequence	AACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCACAAGCUCGCUUCUAUGGGUCUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0047594 miRBase ID: dno-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Gadus morhua

Stem-loop ID	gmo-mir-99
Stem-loop Accession #	MI0036171
Stem-loop Sequence	AACCCGUAGAUCCGAUCUUGUGGCAAAUAUGACAGCACAAGUUCGCUUCUGCAGGUCU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0044269 miRBase ID: gmo-miR-99-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Gorilla gorilla

Stem-loop ID	ggo-mir-99a
Stem-loop Accession #	MI0002704
Stem-loop Sequence	CCCAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCACAAGCUCGCUUCUAUGGGUCUGUGUCAGUGUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0002412 miRBase ID: ggo-miR-99a Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Guinea pig

Stem-loop ID	cpo-mir-99a
Stem-loop Accession #	MI0038610
Stem-loop Sequence	AACCCGUAGAUCCGAUCUUGUGGUAAAGUGGACGGCACAAGCUCGCUUCUAUGGGUCUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0046941 miRBase ID: cpo-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Horse

Stem-loop ID	eca-mir-99a-2
Stem-loop Accession #	MI0012929
Stem-loop Sequence	CCCAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCUCACAAGCUCGCUUCUAUGGGUCUGUGUCAGUGUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0013184 miRBase ID: eca-miR-99a Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Ictalurus punctatus

Stem-loop ID	ipu-mir-99a
Stem-loop Accession #	MI0024668
Stem-loop Sequence	AACCCGUAGAUCCGAUCUUGUGGCGUAAUCGGCAACCCAAGCUCGAUUCUGUGGGUCU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0029532 miRBase ID: ipu-miR-99a Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Lagothrix lagotricha

Stem-loop ID	lla-mir-99a
Stem-loop Accession #	MI0002706
Stem-loop Sequence	CCCAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCACAAGCUCGCUUCUAUGGGUCUGUGUCAGUGUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0002414 miRBase ID: lla-miR-99a Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Macaca nemestrina

Stem-loop ID	mne-mir-99a
Stem-loop Accession #	MI0002707
Stem-loop Sequence	CCCAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCACAAGCUCGCUUCUAUGGGUCUGUGUCAGUGUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0002415 miRBase ID: mne-miR-99a Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Metriaclima zebra

Stem-loop ID	mze-mir-99b
Stem-loop Accession #	MI0034096
Stem-loop Sequence	AACCCGUAGAUCCGAUCUUGUGGCGAAUCUGACAGCACAAGCUCGCCUCUGUGGGUCUU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0042328 miRBase ID: mze-miR-99b Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Microcebus murinus

Stem-loop ID	mmr-mir-99a
Stem-loop Accession #	MI0039922
Stem-loop Sequence	AACCCGUAGAUCCGAUCUUGUGGUAAAGUGGACCGCACAAGCUCGCUUCUAUGGGUCUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0049202 miRBase ID: mmr-miR-99a Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Neolamprologus brichardi

Stem-loop ID	nbr-mir-99b
Stem-loop Accession #	MI0034341
Stem-loop Sequence	AACCCGUAGAUCCGAUCUUGUGGCAAAUGUGACAGCACAAGCUCGCCUCUGUGGGUCUU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0042505 miRBase ID: nbr-miR-99b Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Ophiophagus hannah

Stem-loop ID	oha-mir-99a
Stem-loop Accession #	MI0031495
Stem-loop Sequence	GAGUGCCAAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUGAAAUACUGUGCACAAGCUCGUUUCUAUGGGUCAGUGUCAGUCUGGUGA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0036964 miRBase ID: oha-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Oreochromis niloticus

Stem-loop ID	oni-mir-99b
Stem-loop Accession #	MI0034604
Stem-loop Sequence	AACCCGUAGAUCCGAUCUUGUGGCAAAUCUGACAGCACAAGCUCGCCUCUGUGGGUCU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0042695 miRBase ID: oni-miR-99b Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Pan paniscus

Stem-loop ID	ppa-mir-99a
Stem-loop Accession #	MI0002708
Stem-loop Sequence	CCCAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCACAAGCUCGCUUCUAUGGGUCUGUGUCAGUGUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0002416 miRBase ID: ppa-miR-99a Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Pan troglodytes

Stem-loop ID	ptr-mir-99a
Stem-loop Accession #	MI0002703
Stem-loop Sequence	CCCAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCACAAGCUCGCUUCUAUGGGUCUGUGUCAGUGUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0002411 miRBase ID: ptr-miR-99a Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Pig

Stem-loop ID	ssc-mir-99a
Stem-loop Accession #	MI0013114
Stem-loop Sequence	CCAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCACAAGCUCGCUUCUAUGGGUCUGUGUCAGUGUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0013896 miRBase ID: ssc-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Pongo pygmaeus

Stem-loop ID	ppy-mir-99a
Stem-loop Accession #	MI0002705
Stem-loop Sequence	CCCAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUAAAGUGGACCGCACAAGCUCGCUUCUAUGGGUCUGUGUCAGUGUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0002413 miRBase ID: ppy-miR-99a Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Pundamilia nyererei

Stem-loop ID	pny-mir-99b
Stem-loop Accession #	MI0034850
Stem-loop Sequence	AACCCGUAGAUCCGAUCUUGUGGCGAAUCUGACAGCACAAGCUCGCCUCUGUGGGUCUU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0042888 miRBase ID: pny-miR-99b Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Rabbit

Stem-loop ID	ocu-mir-99a
Stem-loop Accession #	MI0039264
Stem-loop Sequence	AACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCACAAGCUCGCUUCUAUGGGUCUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0048182 miRBase ID: ocu-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Rhesus monkey

Stem-loop ID	mml-mir-99a
Stem-loop Accession #	MI0002702
Stem-loop Sequence	CCCAUUGGCAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCACAAGCUCGCUUCUAUGGGUCUGUGUCAGUGUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0002410 miRBase ID: mml-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Salmo salar

Stem-loop ID	ssa-mir-99-1
Stem-loop Accession #	MI0026767
Stem-loop Sequence	AACCCGUAGAUCCGAUCUUGUGGCAAAUCUGACAUCACAAGCUCCUCUCUGUGGGUCU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0032718 miRBase ID: ssa-miR-99-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Stem-loop ID	ssa-mir-99-2
Stem-loop Accession #	MI0026768
Stem-loop Sequence	AACCCGUAGAUCCGAUCUUGUGGCGAAUCUGACAUCACAAGCUCGCCUCUGUGGGCCUCU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0032718 miRBase ID: ssa-miR-99-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Tupaia chinensis

Stem-loop ID	tch-mir-99a
Stem-loop Accession #	MI0031223
Stem-loop Sequence	AACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCACAAGCUCGCUUCUAUGGGU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0036563 miRBase ID: tch-miR-99a-5p Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Xenopus tropicalis

Stem-loop ID	xtr-mir-99
Stem-loop Accession #	MI0004821
Stem-loop Sequence	UAACAUAAACCCGUAGAUCCGAUCUUGUGGUGAAUUCCUUUGCUCAAGCUCGUUUCUAUGGGUCUGUGUCA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0003582 miRBase ID: xtr-miR-99 Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Zebrafish

Stem-loop ID	dre-mir-99-1
Stem-loop Accession #	MI0001956
Stem-loop Sequence	GCCACUUGUCAUUAACCCGUAGAUCCGAUCUUGUGAUAAGUUUGAUGGCACAAGCUCGAUUCUAUGGGUCUCUGUCUCUGUGGU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0001812 miRBase ID: dre-miR-99 Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

Stem-loop ID	dre-mir-99-2
Stem-loop Accession #	MI0001957
Stem-loop Sequence	CACUUGUCACAAACCCGUAGAUCCGAUCUUGUGGCGUAAUCGGCAACCCAAGCUCGAUUCUGUGGGUCUCUGUCACUGUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0001812 miRBase ID: dre-miR-99 Mature miRNA Sequence: AACCCGUAGAUCCGAUCUUGUG Chromosome Location: NA

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miRBase Alias:

Staphylococcus schleiferi: ssc-miR-99a (v21)