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See other SPG7 CNV Assays ›
Gene Symbol
SPG7
Assay Reference Genome
Location

Chr.16:89529568 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00004777_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6687

Gene Name:

 SPG7, paraplegin matrix AAA peptidase subunit

Gene Aliases:

 CAR, CMAR, PGN, SPG5C

Location:

 Chr.16:89508379-89557768 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 6 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPG7 NM_003119.3 NP_003110.1
NM_199367.2 NP_955399.1
XM_005256321.4 XP_005256378.1
XM_006721264.3 XP_006721327.1
XM_017023597.1 XP_016879086.1
XM_017023598.1 XP_016879087.1
XM_017023599.1 XP_016879088.1
BC035929.2 AAH35929.1
BC036104.1 AAH36104.1
Y16610.1 CAA76314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639584 Chr.16:89504768 - 89531669 on Build GRCh38 Loss SPG7
esv2758670 Chr.16:89376499 - 89585740 on Build GRCh38 Gain SPG7 CPNE7 LOC101927817 SNORD68 RPL13 ANKRD11
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss ZNF778 PRDM7 VPS9D1-AS1 TUBB3 DEF8 CPNE7 LOC100287036 SPATA33 FANCA LOC105371419 SPATA2L LOC101927817 TCF25 RPL13 CENPBD1 FAM157C SPG7 AFG3L1P VPS9D1 GAS8-AS1 TUBB8P7 ANKRD11 CDK10 DBNDD1 MC1R LOC105371414 LOC107984817 DPEP1 GAS8 SPIRE2 CHMP1A SNORD68 ZNF276 URAHP
nsv471118 Chr.16:89446826 - 89600929 on Build GRCh38 Gain SPG7 CPNE7 LOC101927817 SNORD68 RPL13 ANKRD11
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain DPEP1 SPG7 CPNE7 CHMP1A LOC101927817 SNORD68 RPL13 SPATA33 ANKRD11
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss TUBB3 DEF8 CDT1 LOC100289580 LOC100287036 SPATA33 PIEZO1 ACSF3 LOC105371419 SPATA2L LOC101927817 TCF25 CENPBD1 LOC101927793 FAM157C PABPN1L SNAI3 MVD SNAI3-AS1 DBNDD1 MC1R LOC105371414 LOC107984817 APRT LOC105371409 CHMP1A LOC100129697 SNORD68 URAHP RNF166 ZNF778 PRDM7 VPS9D1-AS1 CPNE7 CBFA2T3 FANCA CTU2 RPL13 CDH15 MIR4722 SPG7 LOC339059 AFG3L1P VPS9D1 GAS8-AS1 TUBB8P7 ANKRD11 CDK10 LOC400558 DPEP1 GALNS GAS8 SPIRE2 LOC107987238 IL17C ZNF276 TRAPPC2L LINC00304 CYBA SLC22A31
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion VPS9D1-AS1 SPG7 CPNE7 VPS9D1 SPATA33 CDK10 DPEP1 FANCA SPATA2L CHMP1A SNORD68 RPL13 ZNF276

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