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See other ALG1 CNV Assays ›
Gene Symbol
ALG1
Assay Reference Genome
Location

Chr.16:5073037 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00008505_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 56052

Gene Name:

 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase

Gene Aliases:

 CDG1K, HMAT1, HMT-1, HMT1, MT-1, Mat-1, hMat-1

Location:

 Chr.16:5071809-5087379 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 3 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ALG1 NM_019109.4 NP_061982.3
XM_011522565.1 XP_011520867.1
XM_017023457.1 XP_016878946.1
XM_017023458.1 XP_016878947.1
AB019038.1 BAA90748.1
AK075373.1 BAC11576.1
AK298144.1
AK311475.1
AY359073.1 AAQ89432.1
BC004402.1 AAH04402.1
BC031095.1 AAH31095.1
BM767933.1
DA879477.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1722 Chr.16:5031097 - 5075947 on Build GRCh38 Deletion NAGPA-AS1 ALG1 C16orf89 NAGPA
nsv1042612 Chr.16:4965694 - 5150514 on Build GRCh38 Loss NAGPA-AS1 SEC14L5 ALG1 C16orf89 EEF2KMT NAGPA
nsv428318 Chr.16:5011594 - 5374828 on Build GRCh38 Gain NAGPA-AS1 SEC14L5 ALG1 RBFOX1 C16orf89 EEF2KMT NAGPA
nsv1052766 Chr.16:5041397 - 5146885 on Build GRCh38 Loss NAGPA-AS1 ALG1 C16orf89 EEF2KMT
esv3637714 Chr.16:4958035 - 5079276 on Build GRCh38 Gain NAGPA-AS1 SEC14L5 ALG1 C16orf89 NAGPA
esv3637713 Chr.16:4957958 - 5307305 on Build GRCh38 Gain NAGPA-AS1 SEC14L5 ALG1 RBFOX1 C16orf89 EEF2KMT NAGPA
esv25186 Chr.16:4858500 - 5142800 on Build GRCh38 Gain NAGPA-AS1 SEC14L5 ALG1 PPL C16orf89 UBN1 EEF2KMT NAGPA
nsv482188 Chr.16:5071809 - 5087377 on Build GRCh38 Gain ALG1 EEF2KMT
esv2422516 Chr.16:4775920 - 5160979 on Build GRCh38 Deletion NAGPA-AS1 ROGDI SEC14L5 SMIM22 ALG1 PPL SEPT12 C16orf89 UBN1 EEF2KMT GLYR1 NAGPA
nsv1046986 Chr.16:4049000 - 5555721 on Build GRCh38 Gain NMRAL1 NUDT16L1 ZNF500 CDIP1 UBN1 GLYR1 C16orf96 MIR6769A SRL NAGPA-AS1 GLIS2-AS1 ALG1 TFAP4 PPL C16orf89 NAGPA SEC14L5 VASN MGRN1 ADCY9 LOC105371063 LINC01569 DNAJA3 ROGDI SMIM22 HMOX2 ANKS3 C16orf71 GLIS2 CORO7-PAM16 CORO7 RBFOX1 PAM16 SEPT12 EEF2KMT UBALD1
esv34300 Chr.16:5005938 - 5322534 on Build GRCh38 Gain NAGPA-AS1 SEC14L5 ALG1 RBFOX1 C16orf89 EEF2KMT NAGPA
nsv1038475 Chr.16:5004985 - 5310633 on Build GRCh38 Gain NAGPA-AS1 SEC14L5 ALG1 RBFOX1 C16orf89 EEF2KMT NAGPA
nsv457360 Chr.16:4960912 - 5284683 on Build GRCh38 Loss NAGPA-AS1 SEC14L5 ALG1 RBFOX1 C16orf89 EEF2KMT NAGPA
esv2760069 Chr.16:4922849 - 5374828 on Build GRCh38 Gain+Loss NAGPA-AS1 SEC14L5 ALG1 RBFOX1 PPL C16orf89 EEF2KMT NAGPA
nsv571304 Chr.16:5069871 - 5178792 on Build GRCh38 Loss ALG1 EEF2KMT
nsv817715 Chr.16:5006294 - 5309352 on Build GRCh38 Gain NAGPA-AS1 SEC14L5 ALG1 RBFOX1 C16orf89 EEF2KMT NAGPA
nsv1039432 Chr.16:5013335 - 5074451 on Build GRCh38 Loss NAGPA-AS1 SEC14L5 ALG1 C16orf89 NAGPA

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