Hs00036306_cn

• Gene Symbol: JAZF1
• Assay Reference Genome Location: Chr.7:27831120 on build GRCh38
• Cytoband: 7p15.2

Target Gene Details

• Entrez Gene ID: 221895
• Gene Name: JAZF zinc finger 1
• Gene Aliases: TIP27, ZNF802
• Location: Chr.7:27830573-28180818 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
JAZF1	NM_175061.3	5	2653	NP_778231.2
	XM_006715656.1	6	2529	XP_006715719.1
	XM_017011831.1	5	2421	XP_016867320.1
	XM_017011832.1	5	2353	XP_016867321.1
	AK000711.1	2	1880
	AK091311.1	5	2578
	AL832491.1	3	2231	CAH10579.2
	AL834234.1	4	2372	CAD38912.1
	AY372319.1	5	2431	AAQ74874.1
	BC042441.1	6	2441	AAH42441.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv5677	Chr.7:27799885 - 27844886 on Build GRCh38	Deletion	TAX1BP1 JAZF1
nsv1030685	Chr.7:27804419 - 28137682 on Build GRCh38	Loss	TAX1BP1 JAZF1
esv3891091	Chr.7:27821143 - 28105945 on Build GRCh38	Gain	TAX1BP1 JAZF1
esv2759520	Chr.7:27753997 - 27933250 on Build GRCh38	Loss	TAX1BP1 JAZF1

More Information

Additional Information:

For this assay, SNP(s) [rs114700625] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
lipid metabolic process

Function(s)

nucleic acid binding
transcription corepressor activity
metal ion binding