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See other SPG7 CNV Assays ›
Gene Symbol
SPG7
Assay Reference Genome
Location

Chr.16:89531913 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00070026_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6687

Gene Name:

 SPG7, paraplegin matrix AAA peptidase subunit

Gene Aliases:

 CAR, CMAR, PGN, SPG5C

Location:

 Chr.16:89508379-89557768 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPG7 NM_003119.3 NP_003110.1
NM_199367.2 NP_955399.1
XM_005256321.4 XP_005256378.1
XM_006721264.3 XP_006721327.1
XM_017023597.1 XP_016879086.1
XM_017023598.1 XP_016879087.1
XM_017023599.1 XP_016879088.1
BC035929.2 AAH35929.1
BC036104.1 AAH36104.1
Y16610.1 CAA76314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2758670 Chr.16:89376499 - 89585740 on Build GRCh38 Gain SPG7 ANKRD11 SNORD68 CPNE7 RPL13 LOC101927817
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss ZNF778 URAHP ANKRD11 AFG3L1P CENPBD1 SPG7 TUBB3 ZNF276 LOC100287036 VPS9D1-AS1 LOC107984817 DEF8 GAS8 DBNDD1 FAM157C SPIRE2 LOC105371419 SPATA2L CHMP1A TCF25 PRDM7 SNORD68 FANCA RPL13 VPS9D1 LOC105371414 DPEP1 LOC101927817 TUBB8P7 GAS8-AS1 SPATA33 CPNE7 CDK10 MC1R
nsv471118 Chr.16:89446826 - 89600929 on Build GRCh38 Gain SPG7 ANKRD11 SNORD68 CPNE7 RPL13 LOC101927817
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain SPG7 ANKRD11 SNORD68 SPATA33 CPNE7 RPL13 DPEP1 LOC101927817 CHMP1A
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss URAHP ANKRD11 TRAPPC2L CDH15 LOC100289580 AFG3L1P ZNF276 LOC400558 DEF8 DBNDD1 FAM157C SPIRE2 LOC105371419 SPATA2L LOC339059 GALNS CTU2 CDT1 PRDM7 RPL13 LOC105371409 VPS9D1 LOC105371414 MIR4722 LOC101927817 LOC100129697 SNAI3-AS1 CBFA2T3 GAS8-AS1 CPNE7 SLC22A31 SNAI3 ZNF778 ACSF3 PABPN1L PIEZO1 APRT CENPBD1 SPG7 TUBB3 LOC100287036 VPS9D1-AS1 LINC00304 LOC107984817 GAS8 CYBA CHMP1A TCF25 IL17C SNORD68 FANCA MVD DPEP1 LOC107987238 TUBB8P7 SPATA33 CDK10 RNF166 LOC101927793 MC1R
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion SNORD68 FANCA RPL13 VPS9D1 DPEP1 SPG7 ZNF276 VPS9D1-AS1 SPATA33 CPNE7 CDK10 SPATA2L CHMP1A

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