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See other SPG7 CNV Assays ›
Gene Symbol
SPG7
Assay Reference Genome
Location

Chr.16:89526452 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00092510_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6687

Gene Name:

 SPG7, paraplegin matrix AAA peptidase subunit

Gene Aliases:

 CAR, CMAR, PGN, SPG5C

Location:

 Chr.16:89508379-89557768 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 5 - Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPG7 NM_003119.3 NP_003110.1
NM_199367.2 NP_955399.1
XM_005256321.4 XP_005256378.1
XM_006721264.3 XP_006721327.1
XM_017023597.1 XP_016879086.1
XM_017023598.1 XP_016879087.1
XM_017023599.1 XP_016879088.1
BC035929.2 AAH35929.1
BC036104.1 AAH36104.1
Y16610.1 CAA76314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639586 Chr.16:89514722 - 89527655 on Build GRCh38 Gain SPG7
esv3639584 Chr.16:89504768 - 89531669 on Build GRCh38 Loss SPG7
esv2758670 Chr.16:89376499 - 89585740 on Build GRCh38 Gain ANKRD11 LOC101927817 SPG7 SNORD68 CPNE7 RPL13
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss DBNDD1 SPIRE2 LOC105371419 LOC107984817 GAS8-AS1 AFG3L1P URAHP GAS8 ZNF276 DEF8 FANCA SPATA2L FAM157C SNORD68 MC1R LOC105371414 ANKRD11 SPATA33 LOC101927817 VPS9D1-AS1 TUBB3 SPG7 VPS9D1 RPL13 LOC100287036 DPEP1 CHMP1A CENPBD1 TCF25 PRDM7 CDK10 ZNF778 CPNE7 TUBB8P7
nsv471118 Chr.16:89446826 - 89600929 on Build GRCh38 Gain ANKRD11 LOC101927817 SPG7 SNORD68 CPNE7 RPL13
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain ANKRD11 DPEP1 CHMP1A SPATA33 LOC101927817 SPG7 SNORD68 CPNE7 RPL13
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC105371409 DBNDD1 SPIRE2 LOC107984817 GAS8-AS1 RNF166 PIEZO1 MIR4722 CDT1 CDH15 LOC100289580 LOC105371414 GALNS SPG7 LOC400558 VPS9D1 LOC107987238 CTU2 RPL13 LOC100287036 DPEP1 CHMP1A CENPBD1 PRDM7 ACSF3 SNAI3 CBFA2T3 APRT TUBB8P7 LOC105371419 AFG3L1P IL17C URAHP LINC00304 GAS8 ZNF276 TRAPPC2L SNAI3-AS1 DEF8 FANCA SLC22A31 SPATA2L FAM157C SNORD68 MVD MC1R ANKRD11 CYBA SPATA33 LOC101927817 VPS9D1-AS1 TUBB3 LOC100129697 TCF25 PABPN1L CDK10 LOC339059 LOC101927793 ZNF778 CPNE7
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion SPATA33 VPS9D1-AS1 SPG7 VPS9D1 RPL13 DPEP1 CHMP1A ZNF276 FANCA SPATA2L CDK10 SNORD68 CPNE7

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