Hs00099070_cn

• Gene Symbol: CD151
• Assay Reference Genome Location: Chr.11:837483 on build GRCh38
• Cytoband: 11p15.5

Target Gene Details

• Entrez Gene ID: 977
• Gene Name: CD151 molecule (Raph blood group)
• Gene Aliases: GP27, MER2, PETA-3, RAPH, SFA1, TSPAN24
• Location: Chr.11:832952-838835 on Build GRCh38
• Assay Gene Location: Overlaps Intron 6 - Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CD151	NM_001039490.1			NP_001034579.1
	NM_004357.4			NP_004348.2
	NM_139029.1			NP_620598.1
	NM_139030.3			NP_620599.1
	AK130369.1			BAC85335.1
	AK223186.1			BAD96906.1
	AK293073.1
	AL161965.1
	BC001374.2			AAH01374.1
	BC013302.2			AAH13302.1
	BQ957432.1
	BT007397.1			AAP36061.1
	BT020132.1			AAV38934.1
	CR456826.1			CAG33107.1
	CR542098.1			CAG46895.1
	D29963.1			BAA06229.1
	U14650.1			AAA87064.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv1013n100	Chr.11:772982 - 933569 on Build GRCh38	Gain	PDDC1 LOC171391 SLC25A22 CEND1 CD151 AP2A2 PNPLA2 RPLP2 CRACR2B TSPAN4 PIDD1 POLR2L SNORA52 CHID1 PANO1
esv2759794	Chr.11:409846 - 1336162 on Build GRCh38	Loss	PDDC1 LOC171391 MIR210 MUC5AC ANO9 CRACR2B HRAS TSPAN4 DEAF1 POLR2L CHID1 PANO1 PTDSS2 LMNTD2 CDHR5 MIR6744 EPS8L2 SCT TOLLIP-AS1 TOLLIP MUC6 RASSF7 TMEM80 IRF7 LOC101059906 DRD4 RNH1 SLC25A22 CEND1 CD151 AP2A2 SIGIRR MUC2 PNPLA2 RPLP2 MUC5B MIR210HG PHRF1 PIDD1 TALDO1 LOC101927503 SNORA52 LOC143666 LRRC56
nsv552879	Chr.11:836864 - 842627 on Build GRCh38	Loss	POLR2L CD151
dgv182e199	Chr.11:349830 - 943372 on Build GRCh38	Deletion	PDDC1 LOC171391 MIR210 ANO9 CRACR2B HRAS TSPAN4 DEAF1 POLR2L CHID1 PANO1 PTDSS2 LMNTD2 CDHR5 EPS8L2 SCT RASSF7 TMEM80 IRF7 LOC101059906 DRD4 RNH1 SLC25A22 CEND1 CD151 AP2A2 SIGIRR PNPLA2 PKP3 RPLP2 B4GALNT4 MIR210HG PHRF1 PIDD1 TALDO1 SNORA52 LOC143666 LRRC56
nsv1159791	Chr.11:461793 - 909492 on Build GRCh38	Deletion	PDDC1 LOC171391 MIR210 CRACR2B HRAS TSPAN4 DEAF1 POLR2L CHID1 PANO1 PTDSS2 LMNTD2 CDHR5 EPS8L2 SCT RASSF7 TMEM80 IRF7 LOC101059906 DRD4 RNH1 SLC25A22 CEND1 CD151 PNPLA2 RPLP2 MIR210HG PHRF1 PIDD1 TALDO1 SNORA52 LOC143666 LRRC56
nsv552871	Chr.11:766479 - 870446 on Build GRCh38	Loss	PDDC1 LOC171391 SLC25A22 CEND1 CD151 PNPLA2 RPLP2 CRACR2B TSPAN4 PIDD1 POLR2L SNORA52 CHID1 PANO1
nsv469923	Chr.11:378188 - 1302334 on Build GRCh38	Loss	PDDC1 LOC171391 MIR210 MUC5AC ANO9 CRACR2B HRAS TSPAN4 DEAF1 POLR2L CHID1 PANO1 PTDSS2 LMNTD2 CDHR5 MIR6744 EPS8L2 SCT TOLLIP MUC6 RASSF7 TMEM80 IRF7 LOC101059906 DRD4 RNH1 SLC25A22 CEND1 CD151 AP2A2 SIGIRR MUC2 PNPLA2 PKP3 RPLP2 MUC5B B4GALNT4 MIR210HG PHRF1 PIDD1 TALDO1 LOC101927503 SNORA52 LOC143666 LRRC56
dgv1526n54	Chr.11:812533 - 843713 on Build GRCh38	Gain	TSPAN4 POLR2L CD151 PNPLA2 RPLP2 CRACR2B
nsv552874	Chr.11:823590 - 843713 on Build GRCh38	Gain	TSPAN4 POLR2L CD151 PNPLA2 CRACR2B
nsv552880	Chr.11:836971 - 839155 on Build GRCh38	Loss	CD151
nsv832044	Chr.11:809019 - 938308 on Build GRCh38	Loss	TSPAN4 PIDD1 POLR2L SNORA52 CHID1 CD151 AP2A2 PNPLA2 RPLP2 CRACR2B
nsv1040044	Chr.11:776335 - 900929 on Build GRCh38	Gain+Loss	PDDC1 LOC171391 SLC25A22 CEND1 CD151 PNPLA2 RPLP2 CRACR2B TSPAN4 PIDD1 POLR2L SNORA52 CHID1 PANO1
nsv1048774	Chr.11:816471 - 900929 on Build GRCh38	Gain	TSPAN4 POLR2L CHID1 CD151 PNPLA2 CRACR2B
nsv951272	Chr.11:751201 - 911500 on Build GRCh38	Deletion	PDDC1 LOC171391 SLC25A22 CEND1 CD151 PNPLA2 RPLP2 CRACR2B TSPAN4 PIDD1 TALDO1 POLR2L SNORA52 CHID1 PANO1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

cell adhesion
cell surface receptor signaling pathway
cell migration
hemidesmosome assembly
T cell proliferation

Function(s)

integrin binding
protein binding