Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 3158 |
Gene Name: | 3-hydroxy-3-methylglutaryl-CoA synthase 2 |
Gene Aliases: |
- |
Location: |
Chr.1:119747996-119769125 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 8 - Exon 8 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| HMGCS2 | NM_001166107.1 | NP_001159579.1 | ||
| NM_005518.3 | NP_005509.1 | |||
| XM_011541313.1 | XP_011539615.1 | |||
| AK301594.1 | ||||
| AK302276.1 | ||||
| AK303777.1 | ||||
| AK313590.1 | ||||
| BC044217.1 | AAH44217.1 | |||
| CR456850.1 | CAG33131.1 | |||
| U12789.1 | AAA92674.1 | |||
| X83618.1 | CAA58593.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv831215 | Chr.1:119723826 - 119905846 on Build GRCh38 | Gain |
 PHGDH
REG4
NBPF7
ADAM30
HMGCS2
|
| nsv524681 | Chr.1:118890895 - 121570001 on Build GRCh38 | Gain |
LOC100996720
NOTCH2
HSD3B2
LOC101929147
REG4
LOC100996318
LINC00622
ZNF697
PFN1P2
LOC105378933
NBPF26
HSD3BP4
LOC101929796
RNVU1-4
HIST2H2BA
NBPF7
PPIAL4A
LOC100996721
WARS2-IT1
LOC100996724
HAO2-IT1
SRGAP2C
NBPF8
SRGAP2-AS1
FCGR1B
LOC101929798
WARS2
HSD3B1
RNVU1-19
HAO2
PHGDH
EMBP1
LINC00623
FAM72B
TBX15
LOC105369199
ADAM30
HMGCS2
SEC22B
|
| nsv428201 | Chr.1:119724690 - 120154589 on Build GRCh38 | Gain |
PHGDH
NOTCH2
REG4
NBPF7
ADAM30
HMGCS2
SEC22B
|
Back To TopMore Information
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
Back To Top