Genomic Map
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Target Gene Details
Entrez Gene ID: | 3158 |
Gene Name: | 3-hydroxy-3-methylglutaryl-CoA synthase 2 |
Gene Aliases: |
- |
Location: |
Chr.1:119747996-119769125 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| HMGCS2 | NM_001166107.1 | 1 | 101 | NP_001159579.1 |
| NM_005518.3 | 1 | 101 | NP_005509.1 | |
| XM_011541313.1 | 1 | 294 | XP_011539615.1 | |
| AK301594.1 | 1 | 71 | ||
| AK302276.1 | 1 | 74 | ||
| AK303777.1 | 1 | 74 | ||
| AK313590.1 | 1 | 76 | ||
| BC044217.1 | 1 | 54 | AAH44217.1 | |
| BF964973.1 | 1 | 75 | ||
| BP420631.1 | 1 | 110 | ||
| CR456850.1 | CAG33131.1 | |||
| X83618.1 | 1 | 64 | CAA58593.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv831215 | Chr.1:119723826 - 119905846 on Build GRCh38 | Gain |
 PHGDH
REG4
NBPF7
ADAM30
HMGCS2
|
| nsv524681 | Chr.1:118890895 - 121570001 on Build GRCh38 | Gain |
EMBP1
NBPF26
LINC00622
PHGDH
SRGAP2-AS1
LOC101929798
PFN1P2
LOC105378933
SEC22B
NBPF7
HAO2
HSD3BP4
NBPF8
LOC101929796
FAM72B
PPIAL4A
FCGR1B
LOC100996720
LOC100996724
WARS2
SRGAP2C
ZNF697
HIST2H2BA
WARS2-IT1
RNVU1-19
LOC105369199
ADAM30
HSD3B2
HMGCS2
HSD3B1
LOC100996721
TBX15
NOTCH2
LINC00623
LOC101929147
HAO2-IT1
REG4
RNVU1-4
LOC100996318
|
| nsv428201 | Chr.1:119724690 - 120154589 on Build GRCh38 | Gain |
SEC22B
PHGDH
REG4
NBPF7
ADAM30
HMGCS2
NOTCH2
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Gene Ontology Categories:
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