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See other SPG7 CNV Assays ›
Gene Symbol
SPG7
Assay Reference Genome
Location

Chr.16:89532543 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00122138_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6687

Gene Name:

 SPG7, paraplegin matrix AAA peptidase subunit

Gene Aliases:

 CAR, CMAR, PGN, SPG5C

Location:

 Chr.16:89508379-89557768 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPG7 NM_003119.3 9 1261 NP_003110.1
NM_199367.2 9 1261 NP_955399.1
XM_005256321.4 9 1270 XP_005256378.1
XM_006721264.3 9 1270 XP_006721327.1
XM_017023597.1 9 1270 XP_016879086.1
XM_017023598.1 9 1270 XP_016879087.1
XM_017023599.1 9 1270 XP_016879088.1
BC035929.2 8 1044 AAH35929.1
BC036104.1 9 1246 AAH36104.1
Y16610.1 9 1243 CAA76314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2758670 Chr.16:89376499 - 89585740 on Build GRCh38 Gain LOC101927817 SNORD68 CPNE7 RPL13 ANKRD11 SPG7
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss DEF8 CDK10 SNORD68 FANCA AFG3L1P LOC105371414 LOC101927817 SPIRE2 MC1R SPATA2L DPEP1 SPATA33 ANKRD11 LOC100287036 TUBB3 TUBB8P7 TCF25 LOC107984817 ZNF778 GAS8 URAHP VPS9D1 CPNE7 RPL13 SPG7 FAM157C CENPBD1 DBNDD1 VPS9D1-AS1 CHMP1A LOC105371419 ZNF276 GAS8-AS1 PRDM7
nsv471118 Chr.16:89446826 - 89600929 on Build GRCh38 Gain LOC101927817 SNORD68 CPNE7 RPL13 ANKRD11 SPG7
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain LOC101927817 SNORD68 DPEP1 CPNE7 RPL13 SPATA33 ANKRD11 SPG7 CHMP1A
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss DEF8 SNORD68 IL17C CDT1 LOC105371414 SNAI3-AS1 LOC107987238 ANKRD11 ACSF3 CBFA2T3 MVD TUBB8P7 TCF25 LOC107984817 GAS8 URAHP VPS9D1 LOC101927793 CPNE7 RPL13 SPG7 RNF166 DBNDD1 CHMP1A CDH15 CYBA LOC339059 LOC100289580 PRDM7 CDK10 PIEZO1 FANCA AFG3L1P MIR4722 GALNS LOC105371409 LOC101927817 SPIRE2 MC1R SPATA2L DPEP1 LINC00304 SLC22A31 SPATA33 LOC100287036 PABPN1L TUBB3 ZNF778 LOC400558 CTU2 FAM157C CENPBD1 TRAPPC2L VPS9D1-AS1 LOC105371419 SNAI3 LOC100129697 APRT ZNF276 GAS8-AS1
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion CDK10 SNORD68 VPS9D1 CPNE7 RPL13 SPG7 FANCA VPS9D1-AS1 CHMP1A SPATA2L DPEP1 ZNF276 SPATA33

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