Genomic Map
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Target Gene Details
Entrez Gene ID: | 64324 |
Gene Name: | nuclear receptor binding SET domain protein 1 |
Gene Aliases: |
ARA267, KMT3B, SOTOS, SOTOS1, STO |
Location: |
Chr.5:177133079-177300213 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| NSD1 | NM_022455.4 | 2 | 491 | NP_071900.2 |
| NM_172349.2 | NP_758859.1 | |||
| AF322907.1 | 1 | 371 | AAK92049.1 | |
| AF380302.1 | AAL27991.1 | |||
| AF395588.1 | 2 | 398 | AAL40694.1 | |
| AK126591.1 | 2 | 500 | ||
| AY049721.1 | 1 | 371 | AAL06645.1 | |
| BC021961.2 | 2 | 525 | AAH21961.1 | |
| BC139789.1 | ||||
| BC150628.1 | ||||
| CN333750.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv1011107 | Chr.5:177130035 - 177141113 on Build GRCh38 | Deletion |
 NSD1
|
| nsv823351 | Chr.5:177079996 - 177144595 on Build GRCh38 | Gain |
ZNF346
FGFR4
NSD1
|
| nsv521574 | Chr.5:177090796 - 177174030 on Build GRCh38 | Loss |
FGFR4
NSD1
|
| dgv363n21 | Chr.5:176931607 - 177242486 on Build GRCh38 | Gain |
ZNF346
FGFR4
UIMC1
NSD1
|
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Additional Information:
For this assay, SNP(s) [rs77093936] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Gene Ontology Categories:
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