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See other SPG7 CNV Assays ›
Gene Symbol
SPG7
Assay Reference Genome
Location

Chr.16:89530657 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00130037_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6687

Gene Name:

 SPG7, paraplegin matrix AAA peptidase subunit

Gene Aliases:

 CAR, CMAR, PGN, SPG5C

Location:

 Chr.16:89508379-89557768 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPG7 NM_003119.3 NP_003110.1
NM_199367.2 NP_955399.1
XM_005256321.4 XP_005256378.1
XM_006721264.3 XP_006721327.1
XM_017023597.1 XP_016879086.1
XM_017023598.1 XP_016879087.1
XM_017023599.1 XP_016879088.1
BC035929.2 AAH35929.1
BC036104.1 AAH36104.1
Y16610.1 CAA76314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639584 Chr.16:89504768 - 89531669 on Build GRCh38 Loss SPG7
esv2758670 Chr.16:89376499 - 89585740 on Build GRCh38 Gain RPL13 LOC101927817 ANKRD11 SNORD68 CPNE7 SPG7
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss VPS9D1 TUBB3 LOC105371414 FANCA RPL13 VPS9D1-AS1 TUBB8P7 TCF25 ANKRD11 SNORD68 LOC107984817 CPNE7 MC1R SPATA33 CDK10 ZNF778 CENPBD1 FAM157C SPATA2L DPEP1 CHMP1A SPG7 GAS8 LOC105371419 URAHP GAS8-AS1 PRDM7 LOC101927817 SPIRE2 DBNDD1 DEF8 ZNF276 LOC100287036 AFG3L1P
nsv471118 Chr.16:89446826 - 89600929 on Build GRCh38 Gain RPL13 LOC101927817 ANKRD11 SNORD68 CPNE7 SPG7
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain RPL13 LOC101927817 ANKRD11 SNORD68 CPNE7 DPEP1 SPATA33 CHMP1A SPG7
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss VPS9D1 SNAI3 SNAI3-AS1 CBFA2T3 RPL13 VPS9D1-AS1 CDH15 TCF25 ANKRD11 SNORD68 LOC107984817 CPNE7 MC1R TRAPPC2L LOC107987238 ZNF778 LINC00304 SPATA2L DPEP1 GAS8-AS1 PRDM7 LOC101927817 DBNDD1 LOC105371409 GALNS LOC100287036 TUBB3 LOC105371414 LOC400558 CDT1 IL17C FANCA CYBA MVD LOC100289580 TUBB8P7 APRT LOC100129697 SPATA33 ACSF3 SLC22A31 PABPN1L CDK10 PIEZO1 CENPBD1 LOC339059 FAM157C CHMP1A SPG7 LOC101927793 GAS8 LOC105371419 URAHP MIR4722 CTU2 SPIRE2 RNF166 DEF8 ZNF276 AFG3L1P
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion VPS9D1 CDK10 SPATA2L DPEP1 CHMP1A FANCA SPG7 RPL13 VPS9D1-AS1 SNORD68 ZNF276 CPNE7 SPATA33

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