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Gene Symbol
SPG7
Assay Reference Genome
Location

Chr.16:89524195 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00132306_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6687

Gene Name:

 SPG7, paraplegin matrix AAA peptidase subunit

Gene Aliases:

 CAR, CMAR, PGN, SPG5C

Location:

 Chr.16:89508379-89557768 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPG7 NM_003119.3 4 596 NP_003110.1
NM_199367.2 4 596 NP_955399.1
XM_005256321.4 4 605 XP_005256378.1
XM_006721264.3 4 605 XP_006721327.1
XM_017023597.1 4 605 XP_016879086.1
XM_017023598.1 4 605 XP_016879087.1
XM_017023599.1 4 605 XP_016879088.1
AF090912.1 1 1476 AAF24033.1
BC035929.2 3 379 AAH35929.1
BC036104.1 4 581 AAH36104.1
Y16610.1 4 578 CAA76314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639586 Chr.16:89514722 - 89527655 on Build GRCh38 Gain SPG7
esv3639584 Chr.16:89504768 - 89531669 on Build GRCh38 Loss SPG7
esv2758670 Chr.16:89376499 - 89585740 on Build GRCh38 Gain SPG7 CPNE7 LOC101927817 SNORD68 ANKRD11 RPL13
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss FAM157C VPS9D1-AS1 SNORD68 ANKRD11 CDK10 CHMP1A TUBB8P7 TCF25 LOC100287036 SPG7 LOC107984817 DBNDD1 PRDM7 FANCA DPEP1 URAHP VPS9D1 LOC105371419 SPATA33 ZNF276 CENPBD1 SPIRE2 SPATA2L MC1R AFG3L1P RPL13 ZNF778 TUBB3 GAS8-AS1 DEF8 GAS8 CPNE7 LOC101927817 LOC105371414
nsv471118 Chr.16:89446826 - 89600929 on Build GRCh38 Gain SPG7 CPNE7 LOC101927817 SNORD68 ANKRD11 RPL13
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain SPG7 CPNE7 LOC101927817 DPEP1 SNORD68 ANKRD11 RPL13 CHMP1A SPATA33
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss FAM157C VPS9D1-AS1 SNORD68 CDK10 LOC101927793 CYBA CDT1 TUBB8P7 GALNS LOC107984817 PRDM7 FANCA VPS9D1 LOC105371419 CDH15 PABPN1L CBFA2T3 IL17C SPIRE2 LOC100289580 SPATA2L RPL13 TRAPPC2L SLC22A31 RNF166 ZNF778 GAS8-AS1 LOC339059 CPNE7 MVD APRT LOC105371409 SNAI3-AS1 ANKRD11 CHMP1A ACSF3 TCF25 LOC100287036 SPG7 DBNDD1 DPEP1 URAHP MIR4722 SPATA33 LOC100129697 ZNF276 CENPBD1 CTU2 LINC00304 MC1R AFG3L1P LOC400558 TUBB3 DEF8 GAS8 LOC101927817 PIEZO1 LOC107987238 LOC105371414 SNAI3
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion ZNF276 VPS9D1-AS1 SPATA2L SNORD68 CDK10 RPL13 CHMP1A SPG7 FANCA CPNE7 DPEP1 VPS9D1 SPATA33

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