Hs00136757_cn

• Gene Symbol: GYPA
• Assay Reference Genome Location: Chr.4:144110444 on build GRCh38
• Cytoband: 4q31.21

Target Gene Details

• Entrez Gene ID: 2993
• Gene Name: glycophorin A (MNS blood group)
• Gene Aliases: CD235a, GPA, GPErik, GPSAT, HGpMiV, HGpMiXI, HGpSta(C), MN, MNS, PAS-2
• Location: Chr.4:144109303-144140854 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GYPA	NM_001308187.1	6	1515	NP_001295116.1
	NM_001308190.1	6	1455	NP_001295119.1
	NM_002099.7	7	1554	NP_002090.4
	XM_017008134.1	6	1479	XP_016863623.1
	XM_017008135.1	8	1621	XP_016863624.1
	XM_017008136.1	5	1444	XP_016863625.1
	BC005319.1	7	1460	AAH05319.1
	BC013328.1	7	1441	AAH13328.1
	BX649043.1	1	1438
	L31860.1	7	1458	AAA88051.1
	X51798.1	7	1427	CAA36095.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3894046	Chr.4:144072718 - 144114634 on Build GRCh38	Gain	GYPA
nsv595616	Chr.4:144023955 - 144135334 on Build GRCh38	Gain	GYPA
dgv5430n100	Chr.4:143999095 - 144144371 on Build GRCh38	Gain	GYPA GYPB
dgv127e203	Chr.4:143794196 - 144129470 on Build GRCh38	Gain+Loss	LOC105377458 GYPE GYPA LOC101927636 GYPB
dgv5420n100	Chr.4:143882205 - 144124407 on Build GRCh38	Loss	GYPE GYPA LOC101927636 GYPB
esv34834	Chr.4:143999679 - 144110688 on Build GRCh38	Gain	GYPA GYPB
nsv1027899	Chr.4:144061672 - 144111731 on Build GRCh38	Gain	GYPA
dgv5421n100	Chr.4:143889299 - 144129458 on Build GRCh38	Gain	GYPE GYPA LOC101927636 GYPB
dgv189e55	Chr.4:143800507 - 144110688 on Build GRCh38	Gain	LOC105377458 GYPE GYPA LOC101927636 GYPB
esv3602537	Chr.4:144100754 - 144117717 on Build GRCh38	Loss	GYPA
esv3894043	Chr.4:144038464 - 144135334 on Build GRCh38	Gain	GYPA
esv3894042	Chr.4:143988650 - 144145332 on Build GRCh38	Gain	GYPA GYPB
esv2752026	Chr.4:143800242 - 144202456 on Build GRCh38	Gain	LOC105377458 GYPE GYPA LOC101927636 GYPB
nsv514257	Chr.4:144000341 - 144119733 on Build GRCh38	Gain	GYPA GYPB
nsv428452	Chr.4:143677706 - 144210439 on Build GRCh38	Loss	FREM3 LOC105377458 GYPE GYPA LOC101927636 GYPB
nsv595620	Chr.4:144107278 - 144114975 on Build GRCh38	Loss	GYPA
nsv818282	Chr.4:144000454 - 144112657 on Build GRCh38	Gain	GYPA GYPB
nsv10584	Chr.4:143836418 - 144124500 on Build GRCh38	Gain+Loss	GYPE GYPA LOC101927636 GYPB
esv3575776	Chr.4:144100132 - 144121779 on Build GRCh38	Gain	GYPA
dgv9298n54	Chr.4:144088649 - 144122057 on Build GRCh38	Loss	GYPA
esv3569733	Chr.4:144100146 - 144137611 on Build GRCh38	Loss	GYPA
nsv517006	Chr.4:143823646 - 144135334 on Build GRCh38	Gain+Loss	LOC105377458 GYPE GYPA LOC101927636 GYPB
nsv469732	Chr.4:143957112 - 144138551 on Build GRCh38	Gain	GYPA LOC101927636 GYPB
esv2728476	Chr.4:143745831 - 144154189 on Build GRCh38	Deletion	LOC105377458 GYPE GYPA LOC101927636 GYPB
nsv1020719	Chr.4:143821679 - 144111731 on Build GRCh38	Gain	LOC105377458 GYPE GYPA LOC101927636 GYPB
nsv436411	Chr.4:143881539 - 144122272 on Build GRCh38	Deletion	GYPE GYPA LOC101927636 GYPB
esv2728481	Chr.4:143978248 - 144119589 on Build GRCh38	Deletion	GYPA LOC101927636 GYPB
esv2759288	Chr.4:143427140 - 144210439 on Build GRCh38	Gain+Loss	FREM3 GUSBP5 SMARCA5 LOC105377458 GYPE GYPA LOC101927636 GAB1 SMARCA5-AS1 GYPB
dgv9297n54	Chr.4:143973107 - 144135334 on Build GRCh38	Gain	GYPA LOC101927636 GYPB
dgv5433n100	Chr.4:144038174 - 144111731 on Build GRCh38	Gain+Loss	GYPA
esv2728480	Chr.4:143884064 - 144134952 on Build GRCh38	Deletion	GYPE GYPA LOC101927636 GYPB
esv3602533	Chr.4:144075474 - 144133907 on Build GRCh38	Loss	GYPA
esv3894048	Chr.4:143908753 - 144145332 on Build GRCh38	Gain	GYPE GYPA LOC101927636 GYPB
nsv822759	Chr.4:143997352 - 144118226 on Build GRCh38	Gain	GYPA GYPB
nsv595617	Chr.4:144073750 - 144114635 on Build GRCh38	Loss	GYPA
dgv5431n100	Chr.4:144002985 - 144111731 on Build GRCh38	Gain+Loss	GYPA GYPB

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

viral entry into host cell

Function(s)

virus receptor activity
identical protein binding