Hs00163498_cn

• Gene Symbol: SSH1
• Assay Reference Genome Location: Chr.12:108792785 on build GRCh38
• Cytoband: 12q24.11

Target Gene Details

• Entrez Gene ID: 54434
• Gene Name: slingshot protein phosphatase 1
• Gene Aliases: SSH1L
• Location: Chr.12:108782690-108857606 on Build GRCh38
• Assay Gene Location: Overlaps Intron 18 - Exon 19

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SSH1	NM_001161330.1			NP_001154802.1
	NM_001161331.1			NP_001154803.1
	NM_018984.3			NP_061857.3
	XM_005268984.4			XP_005269041.1
	XM_005268985.2			XP_005269042.1
	XM_011538497.1			XP_011536799.1
	XM_011538499.1			XP_011536801.1
	XM_011538500.2			XP_011536802.1
	XM_011538501.2			XP_011536803.1
	XM_017019491.1			XP_016874980.1
	XM_017019492.1			XP_016874981.1
	XM_017019493.1			XP_016874982.1
	XM_017019494.1			XP_016874983.1
	AB037719.1			BAA92536.1
	AB072355.1			BAB84114.1
	AB072356.1			BAB84115.1
	AK095421.1			BAC04546.1
	BC062341.1			AAH62341.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422361	Chr.12:108792678 - 109118360 on Build GRCh38	Duplication	MIR619 DAO USP30 USP30-AS1 SVOP ALKBH2 SSH1 ACACB UNG
esv2763002	Chr.12:108780333 - 108811466 on Build GRCh38	Gain	SSH1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

protein phosphatase

Gene Ontology Categories:

Process(es)

cell morphogenesis
protein dephosphorylation
regulation of actin polymerization or depolymerization
regulation of lamellipodium assembly
actin cytoskeleton organization
regulation of cellular protein metabolic process
peptidyl-tyrosine dephosphorylation
regulation of axonogenesis
cellular response to ATP

Function(s)

DNA binding
actin binding
phosphoprotein phosphatase activity
protein tyrosine phosphatase activity
protein binding
protein tyrosine/serine/threonine phosphatase activity