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See other CHMP1A CNV Assays ›
Gene Symbol
CHMP1A
Assay Reference Genome
Location

Chr.16:89649465 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00178601_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5119

Gene Name:

 charged multivesicular body protein 1A

Gene Aliases:

 CHMP1, PCH8, PCOLN3, PRSM1, VPS46-1, VPS46A

Location:

 Chr.16:89644431-89657785 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHMP1A NM_001083314.3 NP_001076783.1
NM_002768.4 NP_002759.2
NR_046418.2
XM_011523098.1 XP_011521400.1
AF281063.1 AAG01448.1
AK302055.1
BC132711.1
BC132713.1
BG480548.1
BI826757.1
BT006841.1 AAP35487.1
BX363674.2
CF131483.1
D38554.1 BAA07557.1
HY008690.1
HY089525.1
U58048.1 AAC50775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss SPIRE2 DBNDD1 AFG3L1P DEF8 VPS9D1 SPATA33 TUBB3 MC1R ZNF276 FANCA CHMP1A CENPBD1 VPS9D1-AS1 DPEP1 CDK10 GAS8-AS1 SPATA2L LOC105371419 LOC107984817 TCF25 GAS8
esv2715192 Chr.16:89649120 - 89649628 on Build GRCh38 Deletion CHMP1A
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss SPIRE2 AFG3L1P DEF8 VPS9D1 LOC105371414 ZNF276 CENPBD1 ANKRD11 SNORD68 URAHP GAS8-AS1 LOC105371419 TUBB8P7 FAM157C DBNDD1 LOC101927817 SPATA33 PRDM7 TUBB3 MC1R RPL13 ZNF778 FANCA CHMP1A VPS9D1-AS1 CPNE7 SPG7 LOC100287036 DPEP1 CDK10 SPATA2L LOC107984817 TCF25 GAS8
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain CHMP1A DPEP1 SPATA33 CDK10 SPATA2L
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain RPL13 CHMP1A LOC101927817 CPNE7 SPG7 ANKRD11 DPEP1 SNORD68 SPATA33
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss DEF8 LOC100129697 APRT LOC105371414 RNF166 SNORD68 URAHP LOC105371419 CDT1 PIEZO1 FAM157C PABPN1L DBNDD1 SPATA33 TUBB3 CHMP1A CTU2 LINC00304 LOC107987238 TCF25 SPIRE2 AFG3L1P VPS9D1 MVD ZNF276 CENPBD1 ANKRD11 ACSF3 LOC100289580 LOC400558 GAS8-AS1 SNAI3 TUBB8P7 LOC101927817 GALNS SNAI3-AS1 CBFA2T3 CDH15 LOC101927793 MIR4722 CYBA PRDM7 MC1R RPL13 ZNF778 FANCA IL17C VPS9D1-AS1 CPNE7 SPG7 LOC100287036 DPEP1 LOC105371409 LOC339059 CDK10 SPATA2L SLC22A31 LOC107984817 TRAPPC2L GAS8
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion VPS9D1 SPATA33 ZNF276 RPL13 FANCA CHMP1A VPS9D1-AS1 CPNE7 SPG7 DPEP1 SNORD68 CDK10 SPATA2L
nsv1066382 Chr.16:89537178 - 89661187 on Build GRCh38 Gain RPL13 CHMP1A CPNE7 SPG7 DPEP1 SNORD68 SPATA33

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