Hs00184175_cn

• Gene Symbol: GOLGA3
• Assay Reference Genome Location: Chr.12:132772712 on build GRCh38
• Cytoband: 12q24.33

Target Gene Details

• Entrez Gene ID: 2802
• Gene Name: golgin A3
• Gene Aliases: GCP170, MEA-2
• Location: Chr.12:132768909-132829131 on Build GRCh38
• Assay Gene Location: Within Exon 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GOLGA3	NM_005895.3	24	5449	NP_005886.2
	XM_005266164.4	24	5056	XP_005266221.1
	XM_005266167.4	21	4481	XP_005266224.1
	XM_006719736.3	24	5176	XP_006719799.1
	XM_006719737.3	24	5186	XP_006719800.1
	XM_011534793.2	23	4903	XP_011533095.1
	XM_011534794.2	16	3054	XP_011533096.1
	D63997.1	24	5154	BAA23661.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3631312	Chr.12:132735138 - 132794488 on Build GRCh38	Loss	ANKLE2 GOLGA3
nsv455811	Chr.12:132769585 - 132814368 on Build GRCh38	Loss	GOLGA3
esv3631316	Chr.12:132771535 - 132796367 on Build GRCh38	Loss	GOLGA3
esv3580555	Chr.12:132760405 - 132796737 on Build GRCh38	Loss	ANKLE2 GOLGA3
nsv1037074	Chr.12:132613063 - 132801953 on Build GRCh38	Gain	ANKLE2 PGAM5 P2RX2 PXMP2 GOLGA3 POLE

More Information

Additional Information:

For this assay, SNP(s) [rs115355148] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

cytoskeletal protein, microtubule or microtubule-binding cytoskeletal protein

Gene Ontology Categories:

Process(es)

intra-Golgi vesicle-mediated transport
spermatogenesis
cell-cell adhesion

Function(s)

transporter activity
protein binding
cadherin binding involved in cell-cell adhesion