Hs00185508_cn

• Gene Symbol: SMCP
• Assay Reference Genome Location: Chr.1:152878411 on build GRCh38
• Cytoband: 1q21.3

Target Gene Details

• Entrez Gene ID: 4184
• Gene Name: sperm mitochondria associated cysteine rich protein
• Gene Aliases: HSMCSGEN1, MCS, MCSP
• Location: Chr.1:152878322-152885047 on Build GRCh38
• Assay Gene Location: Overlaps Exon 1 - Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SMCP	NM_030663.2			NP_109588.2
	AK312020.1
	BC014593.2			AAH14593.1
	BC016744.2			AAH16744.1
	X89960.1			CAA62000.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv432n100	Chr.1:152777257 - 152889390 on Build GRCh38	Gain	LCE1D SMCP LCE1E LCE1A LCE6A LCE1C LCE1B
nsv831592	Chr.1:152842578 - 153024686 on Build GRCh38	Gain	LINC01527 SMCP SPRR4 SPRR1A LCE6A IVL SPRR3
esv2761937	Chr.1:152838707 - 152881284 on Build GRCh38	Gain	SMCP LCE6A
nsv547899	Chr.1:152699529 - 153272606 on Build GRCh38	Gain	LINC01527 SMCP C1orf68 LELP1 SPRR2C LCE6A LCE1C LCE4A LCE1D SPRR4 LOC101928009 SPRR2F IVL PRR9 SPRR2B SPRR1A KPRP LCE1A LOR SPRR2D LCE1E SPRR2A SPRR2E SPRR1B LCE1F SPRR2G LCE1B SPRR3
nsv1008447	Chr.1:152838695 - 152881272 on Build GRCh38	Gain	SMCP LCE6A
esv3587570	Chr.1:152831474 - 152882955 on Build GRCh38	Gain	SMCP LCE6A
esv2758970	Chr.1:152500363 - 152925677 on Build GRCh38	Gain+Loss	LCE2D LCE3A SMCP C1orf68 LCE5A LCE3D CRCT1 KPRP LCE3C LCE2A LCE1A LCE6A LCE3B LCE2B LINC00302 LCE1C LCE4A LCE1D LCE1E LCE2C LCE1F IVL LCE3E LCE1B

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

penetration of zona pellucida
sperm motility

Function(s)

molecular_function
protein binding