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See other B4GALNT4 CNV Assays ›
Gene Symbol
B4GALNT4
Assay Reference Genome
Location

Chr.11:380844 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00191490_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 338707

Gene Name:

 beta-1,4-N-acetyl-galactosaminyltransferase 4

Gene Aliases:

 -

Location:

 Chr.11:369773-382117 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 19 - Exon 20
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
B4GALNT4 NM_178537.4 NP_848632.2
XM_017017654.1 XP_016873143.1
AB089939.1 BAD06471.1
AK057774.1 BAB71566.1
BC131528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss IFITM3 RNH1 MIR210HG PKP3 IFITM2 LRRC56 B4GALNT4 PHRF1 IRF7 ANO9 LMNTD2 PGGHG CDHR5 PTDSS2 RASSF7 IFITM5 HRAS SIGIRR LOC101059906 IFITM1 MIR210 LOC143666
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss RNH1 DRD4 TOLLIP POLR2L MIR210HG LRRC56 EPS8L2 B4GALNT4 CRACR2B SCT MUC5AC ANO9 MIR6744 CDHR5 TALDO1 LOC101927503 PTDSS2 MUC5B AP2A2 MIR210 PANO1 LOC171391 PDDC1 LOC143666 SNORA52 CEND1 PKP3 MUC6 PHRF1 RPLP2 IRF7 SLC25A22 LMNTD2 MUC2 DEAF1 PIDD1 RASSF7 HRAS SIGIRR LOC101059906 CHID1 TMEM80 PNPLA2 TSPAN4 CD151
nsv552776 Chr.11:366710 - 432436 on Build GRCh38 Loss PKP3 B4GALNT4 SIGIRR ANO9
esv28392 Chr.11:363975 - 403432 on Build GRCh38 Gain+Loss PKP3 B4GALNT4
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion RNH1 PKP3 B4GALNT4 SIGIRR ANO9 PTDSS2
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain PKP3 B4GALNT4 SIGIRR ANO9
dgv1505n54 Chr.11:198510 - 470331 on Build GRCh38 Gain IFITM3 MIR6743 PKP3 IFITM2 B4GALNT4 NLRP6 ANO9 PSMD13 PGGHG PTDSS2 RIC8A IFITM5 SIGIRR IFITM1 ODF3 BET1L SIRT3
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion PKP3 B4GALNT4 SIGIRR ANO9 PTDSS2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion RNH1 DRD4 POLR2L MIR210HG LRRC56 EPS8L2 B4GALNT4 CRACR2B SCT ANO9 CDHR5 TALDO1 PTDSS2 AP2A2 MIR210 PANO1 LOC171391 PDDC1 LOC143666 SNORA52 CEND1 PKP3 PHRF1 RPLP2 IRF7 SLC25A22 LMNTD2 DEAF1 PIDD1 RASSF7 HRAS SIGIRR LOC101059906 CHID1 TMEM80 PNPLA2 TSPAN4 CD151
dgv1507n54 Chr.11:368778 - 382912 on Build GRCh38 Loss B4GALNT4

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)


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