Hs00196310_cn

• Gene Symbol: TM4SF19
• Assay Reference Genome Location: Chr.3:196323668 on build GRCh38
• Cytoband: 3q29

Target Gene Details

• Entrez Gene ID: 116211
• Gene Name: transmembrane 4 L six family member 19
• Gene Aliases: OCTM4
• Location: Chr.3:196323546-196338420 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TM4SF19	NM_001204897.1	5	933	NP_001191826.1
	NM_001204898.1	4	859	NP_001191827.1
	NM_138461.3	5	937	NP_612470.2
	AF192910.1	5	893	AAQ13824.1
	AK310209.1
	BP395549.1	2	377
	BP396791.1	2	378
	CA430273.1	1	141
	CA489370.1

Target Gene Details

• Entrez Gene ID: 100874214
• Gene Name: TM4SF19 antisense RNA 1
• Gene Aliases: -
• Location: Chr.3:196318332-196325570 on Build GRCh38
• Assay Gene Location: Overlaps Exon 2 - Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TM4SF19-AS1	NR_046724.1
	NR_121665.1
	AK124973.1
	CK819994.1

Target Gene Details

• Entrez Gene ID: 100534611
• Gene Name: TM4SF19-TCTEX1D2 readthrough (NMD candidate)
• Gene Aliases: -
• Location: Chr.3:196316085-196338420 on Build GRCh38
• Assay Gene Location: Within Intron 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TM4SF19-TCTEX1D2	NR_037950.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv997797	Chr.3:195931489 - 196486087 on Build GRCh38	Gain	RNF168 LINC00885 TM4SF19-AS1 UBXN7 ZDHHC19 TM4SF19-TCTEX1D2 SDHAP1 TCTEX1D2 LOC105374301 SLC51A TFRC PCYT1A UBXN7-AS1 TM4SF19
nsv1009811	Chr.3:196124925 - 196411200 on Build GRCh38	Gain	TCTEX1D2 LINC00885 TM4SF19-AS1 SLC51A PCYT1A UBXN7 ZDHHC19 TM4SF19-TCTEX1D2 TM4SF19
nsv593071	Chr.3:196132016 - 196345571 on Build GRCh38	Gain	TCTEX1D2 LINC00885 TM4SF19-AS1 SLC51A PCYT1A ZDHHC19 TM4SF19-TCTEX1D2 TM4SF19
nsv4183	Chr.3:196307196 - 196352238 on Build GRCh38	Deletion	TCTEX1D2 TM4SF19-AS1 UBXN7 TM4SF19-TCTEX1D2 TM4SF19
esv2759213	Chr.3:195382058 - 196344722 on Build GRCh38	Gain+Loss	MUC4 LOC105374297 LINC00885 TM4SF19-AS1 MUC20 LINC00969 PPP1R2 APOD TNK2 ZDHHC19 TM4SF19-TCTEX1D2 SDHAP1 TCTEX1D2 LOC105374301 SLC51A TFRC SDHAP2 PCYT1A LOC101929697 MIR570 MIR6829 LOC105374299 TM4SF19 ACAP2

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation