Hs00199202_cn

• Gene Symbol: NELFB
• Assay Reference Genome Location: Chr.9:137255925 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 25920
• Gene Name: negative elongation factor complex member B
• Gene Aliases: COBRA1, NELF-B
• Location: Chr.9:137255300-137273548 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NELFB	NM_015456.4			NP_056271.3
	AF464935.1			AAL69965.1
	AK091056.1
	BC011892.1			AAH11892.1
	DA210427.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv13009n54	Chr.9:137173890 - 137327859 on Build GRCh38	Loss	TPRN RNF224 TUBB4B ANAPC2 EXD3 CYSRT1 C9orf173-AS1 NELFB SLC34A3 STPG3 TOR4A TMEM203 NDOR1 SSNA1 NRARP FAM166A RNF208
dgv13011n54	Chr.9:137223996 - 137338927 on Build GRCh38	Loss	STPG3 RNF224 TUBB4B EXD3 TOR4A CYSRT1 C9orf173-AS1 NRARP FAM166A NELFB SLC34A3
nsv524322	Chr.9:136795692 - 137482216 on Build GRCh38	Loss	EDF1 RABL6 MIR7114 PRR31 NSMF C9orf173-AS1 PHPT1 MIR3621 SAPCD2 UAP1L1 C9orf142 TMEM203 CCDC183 SSNA1 C8G FBXW5 MAN1B1 TPRN ANAPC2 CYSRT1 LCN12 FUT7 STPG3 MIR4292 C9orf172 ABCA2 FAM166A RNF208 GRIN1 TMEM210 TUBB4B DPP7 LOC101930307 ENTPD2 SLC34A3 CCDC183-AS1 CLIC3 MAN1B1-AS1 C9orf139 MIR4479 ENTPD8 NPDC1 NRARP LRRC26 NOXA1 MAMDC4 PTGDS RNF224 EXD3 NELFB TRAF2 LCNL1 TOR4A PNPLA7 NDOR1
nsv951207	Chr.9:137136949 - 137379148 on Build GRCh38	Deletion	TPRN GRIN1 TMEM210 RNF224 TUBB4B ANAPC2 EXD3 CYSRT1 C9orf173-AS1 NELFB SLC34A3 STPG3 MIR3621 TOR4A TMEM203 NDOR1 SSNA1 NRARP FAM166A RNF208 LRRC26
nsv1161918	Chr.9:137118319 - 137438026 on Build GRCh38	Duplication	TPRN GRIN1 TMEM210 RNF224 TUBB4B ANAPC2 EXD3 CYSRT1 C9orf173-AS1 NELFB SLC34A3 STPG3 MIR3621 TOR4A TMEM203 ENTPD8 NDOR1 SSNA1 NRARP FAM166A RNF208 LRRC26 NOXA1
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	EDF1 RABL6 PRR31 C9orf173-AS1 TMEM141 PHPT1 AGPAT2 MIR3621 SAPCD2 LCN6 SNHG7 UAP1L1 C9orf142 FAM69B TMEM203 CCDC183 SSNA1 C8G FBXW5 MAN1B1 TPRN ANAPC2 LOC100128593 LCN10 CYSRT1 LCN12 FUT7 STPG3 LINC01451 MIR4292 LCN8 C9orf172 ABCA2 SNORA17A FAM166A RNF208 GRIN1 TMEM210 TUBB4B MIR126 DPP7 LOC101930307 HSPC324 ENTPD2 SLC34A3 CCDC183-AS1 SNORA17B CLIC3 EGFL7 MAN1B1-AS1 C9orf139 MIR4479 LCN15 NPDC1 NRARP LRRC26 MAMDC4 PTGDS RNF224 EXD3 NELFB TRAF2 LCNL1 MIR6722 TOR4A NDOR1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

transcription from RNA polymerase II promoter
transcription elongation from RNA polymerase II promoter
negative regulation of transcription elongation from RNA polymerase II promoter
positive regulation of viral transcription

Function(s)

protein binding