Hs00202665_cn

• Gene Symbol: GGA1
• Assay Reference Genome Location: Chr.22:37608512 on build GRCh38
• Cytoband: 22q13.1

Target Gene Details

• Entrez Gene ID: 26088
• Gene Name: golgi associated, gamma adaptin ear containing, ARF binding protein 1
• Gene Aliases: -
• Location: Chr.22:37607235-37633564 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GGA1	NM_001001560.2			NP_001001560.1
	NM_001172687.1			NP_001166158.1
	NM_013365.4			NP_037497.1
	XM_005261517.3	2	213	XP_005261574.1
	XM_011530122.1	2	146	XP_011528424.1
	XM_011530124.1	2	213	XP_011528426.1
	XM_017028760.1	2	213	XP_016884249.1
	XM_017028762.1	2	213	XP_016884251.1
	AK075256.1			BAC11501.1
	DA455573.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv829203	Chr.22:36998126 - 37773322 on Build GRCh38	Loss	LGALS2 IL2RB TEX33 LOC100506271 C1QTNF6 ELFN2 LOC102724378 CARD10 LGALS1 SH3BP1 TRIOBP SSTR3 MFNG KCTD17 TMPRSS6 TST CDC42EP1 CYTH4 MPST NOL12 LOC101927051 PDXP RAC2 GGA1
esv2758838	Chr.22:37607870 - 37869871 on Build GRCh38	Loss	MIR658 MIR659 LOC102724378 LGALS1 SH3BP1 TRIOBP EIF3L H1F0 GCAT NOL12 GALR3 LOC101927051 PDXP ANKRD54 GGA1
nsv471197	Chr.22:37600773 - 37762734 on Build GRCh38	Loss	LOC102724378 NOL12 LOC101927051 PDXP LGALS1 SH3BP1 TRIOBP GGA1
nsv834191	Chr.22:37533773 - 37717344 on Build GRCh38	Loss	LGALS2 CDC42EP1 NOL12 LOC101927051 PDXP LGALS1 SH3BP1 TRIOBP GGA1
nsv1057617	Chr.22:37462633 - 37713698 on Build GRCh38	Gain	LGALS2 CDC42EP1 NOL12 LOC101927051 PDXP CARD10 LGALS1 SH3BP1 TRIOBP GGA1 MFNG

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

intracellular protein transport
vesicle-mediated transport
cellular protein metabolic process
positive regulation of protein catabolic process
toxin transport

Function(s)

molecular_function
protein binding