Hs00207638_cn

• Gene Symbol: FAM189B
• Assay Reference Genome Location: Chr.1:155253713 on build GRCh38
• Cytoband: 1q22

Target Gene Details

• Entrez Gene ID: 10712
• Gene Name: family with sequence similarity 189 member B
• Gene Aliases: C1orf2, COTE1
• Location: Chr.1:155247205-155255483 on Build GRCh38
• Assay Gene Location: Overlaps Intron 4 - Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAM189B	NM_001267608.1			NP_001254537.1
	NM_006589.2			NP_006580.2
	NM_198264.1			NP_937995.1
	XM_005244845.1			XP_005244902.1
	AK093335.1
	BC006493.2			AAH06493.1
	BC007444.2			AAH07444.1
	BC008854.2			AAH08854.1
	BC010471.1			AAH10471.1
	BC017262.2			AAH17262.1
	BC040136.1			AAH40136.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv831636	Chr.1:155249432 - 155475073 on Build GRCh38	Loss	HCN3 MIR555 RUSC1 CLK2 RUSC1-AS1 SCAMP3 PKLR FDPS LOC105371451 POU5F1P4 ASH1L FAM189B
nsv470741	Chr.1:155142784 - 155260340 on Build GRCh38	Loss	THBS3 TRIM46 MUC1 MIR92B KRTCAP2 SCAMP3 GBAP1 GBA FAM189B MTX1
esv33869	Chr.1:155253492 - 155948170 on Build GRCh38	Loss	LOC100505728 CLK2 YY1AP1 LOC105371451 SYT11 SCARNA4 GON4L MSTO2P RUSC1-AS1 SCAMP3 PKLR MSTO1 POU5F1P4 FAM189B RIT1 SNORA80E ARHGEF2 MIR555 SCARNA26B FDPS ASH1L-AS1 SCARNA26A HCN3 RUSC1 DAP3 KIAA0907 ASH1L RXFP4
nsv1011773	Chr.1:155219357 - 155265030 on Build GRCh38	Gain	CLK2 SCAMP3 GBAP1 GBA FAM189B
dgv3n68	Chr.1:155122502 - 155343618 on Build GRCh38	Loss	MUC1 KRTCAP2 CLK2 DPM3 FDPS LOC105371451 GBA THBS3 EFNA1 TRIM46 HCN3 RUSC1 MIR92B RUSC1-AS1 SCAMP3 PKLR SLC50A1 GBAP1 ASH1L FAM189B MTX1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

protein binding
WW domain binding