Genomic Map
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Target Gene Details
Entrez Gene ID: | 402 |
Gene Name: | ADP ribosylation factor like GTPase 2 |
Gene Aliases: |
ARFL2 |
Location: |
Chr.11:65014113-65022185 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 3 - Exon 4 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ARL2 | NM_001199745.1 | NP_001186674.1 | ||
| NM_001667.3 | NP_001658.2 | |||
| AF493888.1 | AAM12602.1 | |||
| AK223502.1 | BAD97222.1 | |||
| BC002530.2 | AAH02530.1 | |||
| BG706294.1 | ||||
| BT006674.1 | AAP35320.1 | |||
| CN338497.1 | ||||
| L13687.1 | AAC37606.1 |
Target Gene Details
Entrez Gene ID: | 100528018 |
Gene Name: | ARL2-SNX15 readthrough (NMD candidate) |
Gene Aliases: |
- |
Location: |
Chr.11:65014113-65040572 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ARL2-SNX15 | NR_037650.1 | |||
| AK096447.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv526181 | Chr.11:64870569 - 65489858 on Build GRCh38 | Gain |
 MIR6749
MIR192
SLC22A20
MIR6750
MAJIN
MIR194-2HG
TIGD3
DPF2
SLC25A45
CDCA5
POLA2
SYVN1
TMEM262
BATF2
VPS51
GPHA2
ZNHIT2
NEAT1
EHD1
SPDYC
MIR6879
SNX15
FRMD8
PPP2R5B
CAPN1
MRPL49
MIR612
TM7SF2
ARL2-SNX15
ATG2A
NAALADL1
ZFPL1
FAU
CDC42EP2
ARL2
SAC3D1
MIR194-2
MIR6751
LOC101927789
|
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Additional Information:
For this assay, SNP(s) [rs79393344] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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