Genomic Map
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Target Gene Details
Entrez Gene ID: | 4245 |
Gene Name: | mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase |
Gene Aliases: |
GLCNAC-TI, GLCT1, GLYT1, GNT-1, GNT-I, GnTI, MGAT |
Location: |
Chr.5:180790541-180815652 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| MGAT1 | NM_001114617.1 | 3 | 1028 | NP_001108089.1 |
| NM_001114618.1 | 3 | 1114 | NP_001108090.1 | |
| NM_001114619.1 | 2 | 591 | NP_001108091.1 | |
| NM_001114620.1 | 2 | 802 | NP_001108092.1 | |
| NM_002406.3 | 2 | 870 | NP_002397.2 | |
| XM_005265915.1 | 3 | 1417 | XP_005265972.1 | |
| XM_005265916.1 | 3 | 1442 | XP_005265973.1 | |
| XM_006714866.1 | 3 | 1004 | XP_006714929.1 | |
| XM_011534559.1 | 3 | 1169 | XP_011532861.1 | |
| XM_011534560.1 | 3 | 1141 | XP_011532862.1 | |
| XM_011534561.1 | 3 | 1563 | XP_011532863.1 | |
| XM_011534562.1 | 2 | 668 | XP_011532864.1 | |
| XM_011534563.2 | 2 | 712 | XP_011532865.1 | |
| XM_017009486.1 | 3 | 1141 | XP_016864975.1 | |
| XM_017009487.1 | 3 | 1237 | XP_016864976.1 | |
| AB209239.1 | 1 | 460 | BAD92476.1 | |
| AF289558.1 | 1 | 498 | AAL55742.1 | |
| AK057194.1 | 3 | 1048 | ||
| AK075429.1 | BAC11616.1 | |||
| AK090523.1 | ||||
| AK092256.1 | 4 | 996 | ||
| AK094130.1 | 3 | 1126 | ||
| AK290769.1 | 2 | 804 | ||
| BC003575.1 | 2 | 612 | AAH03575.1 | |
| CR456861.1 | 1 | 375 | CAG33142.1 | |
| M55621.1 | 2 | 536 | AAA52563.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1161322 | Chr.5:180717688 - 180914895 on Build GRCh38 | Duplication |
 MGAT1
OR2Y1
HEIH
ZFP62
BTNL8
LINC00847
|
| dgv9n29 | Chr.5:180758452 - 180976232 on Build GRCh38 | Loss |
MGAT1
HEIH
ZFP62
BTNL8
LINC00847
|
| esv2759399 | Chr.5:180652970 - 180854476 on Build GRCh38 | Gain |
MGAT1
OR2Y1
HEIH
ZFP62
LINC00847
|
| esv3607794 | Chr.5:180785700 - 180797650 on Build GRCh38 | Gain |
MGAT1
|
| dgv5849n100 | Chr.5:180653795 - 180801163 on Build GRCh38 | Gain |
MGAT1
OR2Y1
|
| nsv600678 | Chr.5:180749005 - 180799673 on Build GRCh38 | Gain |
MGAT1
|
| nsv1026417 | Chr.5:180294376 - 180864360 on Build GRCh38 | Gain |
GFPT2
SCGB3A1
MGAT1
OR2Y1
HEIH
ZFP62
CNOT6
FLT4
LINC00847
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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