Hs00223295_cn

• Gene Symbol: BAIAP3
• Assay Reference Genome Location: Chr.16:1349268 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 8938
• Gene Name: BAI1 associated protein 3
• Gene Aliases: BAP3
• Location: Chr.16:1333605-1349441 on Build GRCh38
• Assay Gene Location: Within Exon 36

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
BAIAP3	NM_001199096.1	33	4350	NP_001186025.1
	NM_001199097.1	34	4400	NP_001186026.1
	NM_001199098.1	34	4331	NP_001186027.1
	NM_001199099.1	34	4316	NP_001186028.1
	NM_001286464.1	34	4451	NP_001273393.1
	NM_003933.4	34	4508	NP_003924.2
	XM_011522728.1	34	5054	XP_011521030.1
	XM_011522729.1	34	4961	XP_011521031.1
	XM_011522730.2	34	4990	XP_011521032.1
	AB018277.2	34	4360
	AF038191.1	9	1700
	AL834321.1	34	4402	CAH56376.1
	BF448577.1	1	184

Target Gene Details

• Entrez Gene ID: 115939
• Gene Name: TSR3, acp transferase ribosome maturation factor
• Gene Aliases: C16orf42
• Location: Chr.16:1349240-1351872 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TSR3	NM_001001410.2			NP_001001410.1
	BC013943.1			AAH13943.1
	BC016699.1			AAH16699.1
	BC017325.2			AAH17325.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2762143	Chr.16:1270592 - 1519404 on Build GRCh38	Gain	C16orf91 GNPTG TSR3 UBE2I BAIAP3 UNKL PTX4 TELO2 CCDC154 CLCN7 LOC105371045 IFT140
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	MIR4717 PKD1 LOC105371049 SNORA10 CAPN15 CCDC154 CCDC78 ABCA3 LOC100287175 HAGHL E4F1 SSTR5 MIR6768 SNORA78 NPRL3 LOC107984876 TELO2 MIR1225 SOX8 PDPK1 NDUFB10 GNG13 MRPS34 HAGH ERVK13-1 LOC105371046 SLC9A3R2 TRAF7 CACNA1H RPS2 LINC00254 MAPK8IP3 CASKIN1 TSR3 POLR3K MPG ATP6V0C IFT140 SNORA64 RPL23AP5 SYNGR3 ZNF598 LOC105371184 LOC652276 MCRIP2 MSRB1 MIR3180-5 SNRNP25 MIR6767 SNHG9 METRN MIR3677 SNORD60 JMJD8 RAB11FIP3 FAHD1 DNASE1L2 HN1L MIR940 C16orf91 LINC00235 PRR35 FLJ42627 METTL26 BAIAP3 STUB1 LMF1-AS1 RNF151 C16orf59 LMF1 LOC105371045 DECR2 MRPL28 TPSAB1 RNPS1 HBQ1 BRICD5 EME2 TPSB2 NHLRC4 RGS11 HBA2 TBL3 LOC105371038 LOC100134368 LOC106660606 SSTR5-AS1 WDR24 MIR4516 WDR90 NUBP2 TSC2 HS3ST6 RPL3L NTN3 LOC101929280 TPSD1 AXIN1 NME3 TBC1D24 PIGQ HBM MIR662 KCTD5 TMEM8A TMEM204 AMDHD2 LOC105371047 ARHGDIG RAB40C LOC107987233 WASIR2 MIR3178 RPUSD1 ECI1 MSLN DDX11L10 SPSB3 ABCA17P CEMP1 PTX4 WFIKKN1 FAM173A CLCN7 C1QTNF8 CCNF MIR5587 HBZ PRR25 RHBDF1 MIR6859-4 RHOT2 CRAMP1 UBE2I NME4 NTHL1 PRSS27 RAB26 PDIA2 RHBDL1 NARFL FAM234A TPSG1 UNKL MEIOB IGFALS PGP NPW CHTF18 MIR3177 LOC729652 NOXO1 HBA1 MIR6511B1 LUC7L FBXL16 PRSS29P MLST8 GNPTG MIR3176 SNHG19 GFER
nsv974746	Chr.16:1328043 - 1351866 on Build GRCh38	Duplication	TSR3 BAIAP3
nsv471066	Chr.16:893361 - 1482836 on Build GRCh38	Loss	TPSB2 C16orf91 TPSG1 BAIAP3 UNKL LMF1-AS1 CCDC154 SSTR5-AS1 CLCN7 LMF1 CACNA1H C1QTNF8 LOC105371045 PRSS29P SSTR5 GNPTG TSR3 UBE2I TPSD1 LOC107984876 TPSAB1 SOX8
dgv2692n100	Chr.16:1002943 - 1394728 on Build GRCh38	Gain	TPSB2 TPSG1 BAIAP3 UNKL SSTR5-AS1 CACNA1H C1QTNF8 PRSS29P SSTR5 GNPTG TSR3 UBE2I TPSD1 TPSAB1
nsv428316	Chr.16:929650 - 1363252 on Build GRCh38	Gain+Loss	TPSB2 TPSG1 BAIAP3 UNKL LMF1-AS1 SSTR5-AS1 LMF1 CACNA1H C1QTNF8 PRSS29P SSTR5 GNPTG TSR3 UBE2I TPSD1 TPSAB1 SOX8
nsv952899	Chr.16:1142501 - 1535899 on Build GRCh38	Deletion	TPSB2 C16orf91 TPSG1 BAIAP3 UNKL PTX4 TMEM204 LOC105371047 CCDC154 CLCN7 CACNA1H LOC105371045 PRSS29P GNPTG TSR3 UBE2I TPSD1 TELO2 TPSAB1 IFT140
nsv1046314	Chr.16:1238517 - 1426464 on Build GRCh38	Loss	PRSS29P C16orf91 GNPTG TSR3 UBE2I BAIAP3 UNKL TPSD1 TPSAB1

More Information

• Set Membership: Intragenic, Exonic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

G-protein coupled receptor signaling pathway
neurotransmitter secretion
maturation of SSU-rRNA

Function(s)

protein C-terminus binding